Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03873 ATGGGTTTCAAAGCTTTCTTTGTgtattcttttgtatttattttaagcTATGGTTTTTCAATGTCTCAAATGGTTCCAGCTGTTTATGTATTTGGAGATTCACTTGTAGATGTTGGAAACAATAATTACTTGACTCTTTCTATTGCTAAGGCTAATCATCGTCATTATGGTATTGATTTTCTTGATCATAAACCAACTGGAAGATTTAGCAACGGCAAAAATGCTGCTGATTTTATTGGTGAGAAATTAGGTTTGGCAACTTCACCACCTTACCTCTTTTTAATATCAAAGGGCAACAAAAATGAGAATAATGTATCATTCATCAATGGTGTTAGCTTTGCCTCCGCAGGTGCTGGAATATTTGATGGTACAGATGACCGTTATAAACAATCGTTACCGTTGACAAAACAAGTGGATTATTACTCAACTGTTGTGTATGGGGAACTGACACGAGAAATTGGAGCAAGTGCTCTACAAAAGCatctatcaaaatcaatttttggtGTGGTGATTGGAAGCAATGATCTCTTTGGATATTTTGAGTCATCTGAACTTCGTAAGAAAAGTACCCCACAACAATATGTTGATTCCATGATTTTCTCACTAAAACTGCAACTACagCGATTATATGATAATGGTGGCCGTAAATTTGAGATTGCGGGAGTAGGGTTACTTGGATGCTGTCCTGTGTTCAGGCTCAAGAACAAAACAGAATGCGTTGTAGAAGTCAATTACTGGTCGGTTCAATATAACAAAGGTCTTCAATCTATGTTGAAAGAATGGCAATCGGAGAATGAAGGCATAATCTACTCCTACTTTGACACTTATTCCGCCATGAGCAGCCTTATTCAAAGTCCAGCTTCCTACGGATTTACGGAGGTGAAAGGTGCTTGTTGTGGACTAGGAGAGTTAAATGCCAGGGCTCCTTGCCTGCCTGTGTCAAACCTTTGTCCCAACAGACAAGACCACGTTTTTTGGGATCAATTTCATCCTACAGAGGCAGCTTCACGTATCTTTGTCGACAAAATTTTCGATGGTTCTTCAACTTACACTTCTCCTATTAATATGAGACAGCTAGTGGCAGCCTGA 1089 0.3765 MGFKAFFVYSFVFILSYGFSMSQMVPAVYVFGDSLVDVGNNNYLTLSIAKANHRHYGIDFLDHKPTGRFSNGKNAADFIGEKLGLATSPPYLFLISKGNKNENNVSFINGVSFASAGAGIFDGTDDRYKQSLPLTKQVDYYSTVVYGELTREIGASALQKHLSKSIFGVVIGSNDLFGYFESSELRKKSTPQQYVDSMIFSLKLQLQRLYDNGGRKFEIAGVGLLGCCPVFRLKNKTECVVEVNYWSVQYNKGLQSMLKEWQSENEGIIYSYFDTYSAMSSLIQSPASYGFTEVKGACCGLGELNARAPCLPVSNLCPNRQDHVFWDQFHPTEAASRIFVDKIFDGSSTYTSPINMRQLVAA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03873 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 360 - -
Tsu05g03873 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 7 360 - -
Tsu05g03873 362 Pfam GDSL-like Lipase/Acylhydrolase 28 342 IPR001087 GO:0016788
Tsu05g03873 362 Gene3D SGNH hydrolase 18 348 IPR036514 -
Tsu05g03873 362 CDD SGNH_plant_lipase_like 26 347 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03873 Tsu-Chr5 49767311 49770783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03873 25 346 Acyl Lipid Metabolism Gene Families AT4G10950 31.804 3.45e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03873 - - gmx:100777307 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03873 05 49767311 49770783 Tsu05g03873 05 49767311 49770783 ECH
Tsu03g01280 03 12230324 12233274 Tsu05g03873 05 49767311 49770783 PCT