Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01280 ATGATGTGGAATtcctttctctttttctttttctctttcttcatcttcaatttaGGATTCTTAGAGGCTCAAAAAGTTCCTGCTATTTATGTTTTTGGAGACTCACTTGTTGATGTTGGAAACAATAATTACTTGAATGATACCTTACTAAAAGCTATTTTTCCTTATTATGGCATTGATTTTCCAACTAAGAAACCTGCTGGGAGGTTTAGTAATGGCAAGAATGCTGCTGATTTGATTGCTGAAAAAATAGGTGTGGCCACTTCACCACCTTACCTGTCCCTAGTATCTAAGATCAAAAGCAACAACAGGAATGTATCCTTTTTGGATGGTGTTAACTTTGCCTCTGGAGGTGCTGCAATCTTTAATGTCACACATAAAAGTTTTTGGCAATCAATACCTTTGACAAAGCAAGTGGACTACTATTCACAAATGCGTGACCAATTGACACAACAAATAGGAGCATCTACACTTCAGAAACATATCTCAGAATCGATCTTCTTTGTTGTAATTGGTAACAATGATATCTTTGATTACTTTAATTCAAAGGATGTTCAAAAGAAAAACACCCCACAAAAGTATGTCAAGTCCATGGCTTCTTCATTAAAAGTGCAACTACAGGTAAACACAATGGTTGTAAGTTGCAACTTAATGGTCGCTATAGTTCTATATGTTCAACATCATTGTTCTAAATTGCGGCTGCAGTCGTGA 711 0.3418 MMWNSFLFFFFSFFIFNLGFLEAQKVPAIYVFGDSLVDVGNNNYLNDTLLKAIFPYYGIDFPTKKPAGRFSNGKNAADLIAEKIGVATSPPYLSLVSKIKSNNRNVSFLDGVNFASGGAAIFNVTHKSFWQSIPLTKQVDYYSQMRDQLTQQIGASTLQKHISESIFFVVIGNNDIFDYFNSKDVQKKNTPQKYVKSMASSLKVQLQVNTMVVSCNLMVAIVLYVQHHCSKLRLQS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01280 236 SUPERFAMILY SGNH hydrolase 28 181 - -
Tsu03g01280 236 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 2 208 - -
Tsu03g01280 236 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 208 - -
Tsu03g01280 236 Pfam GDSL-like Lipase/Acylhydrolase 29 203 IPR001087 GO:0016788
Tsu03g01280 236 Gene3D SGNH hydrolase 19 214 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01280 Tsu-Chr3 12230324 12233274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01280 26 208 Acyl Lipid Metabolism Gene Families AT4G10950 34.054 2.15e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01280 - - mtr:MTR_3g052580 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01280 03 12230324 12233274 Tsu05g03873 05 49767311 49770783 PCT