Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03402 ATGGTTTCCGTTGATAATAATGGTAAAGATGTAATTGAGGAAAGTAACAATAATGGAAGTAAAATGATGGAGTTGACTTCCATAGATATTTCGAGTTCTCGAAGAACGTTGGTTACTGGTGAAAATCCTGGTAGAAAGTTCCCGGGAACGTTGAGTTCTGTTCCTAATAGGATCAACTTCTTGAAATTTGGTTCTGCGTCTGCTAAGTTCAGGCGGCTTGCAACTCAGATGGATTTGGCTTCACAATCTGTGCCTTCTCCGAGTTCACGTAGTTTGAAAGAACGGTTTAGTGGCATGTTTTCTAAGAAACTCGACTGGGATTCGATTAAGAAGATGGCGATAGAATGGATCAGGAACCCAATGAACATGGCCCTATTTGCGTGGATCTTATGTGTTGCTATTTCTGGTGCAATCCTGTTCCTTGTCATGACTGGCATGTTGAATGCTGCGATTCCGAAGAAAGAGACAAGGAATGCATGGTTTGAAGTAAACAATCAAATACTCAATGCGCTGTTTACGCTGATGTGTTTGTATCAGCATCCGAAGAGATTCTACCACCTTGTACTTCTGTGTAGATGGAATCCAACAGATATCATCAAACTTAGAAAGGAGTATTGCAAAAATGGAACTTATAAGCCTCATGAATGGACACACATGATGGTAGTGGTAATTCTCGGTCATGTGAACTGTTTCGCACAATATGCACTTTGCGGTCTAAACATAGGGTATAAAAGATCTCAGCGCCCAGCCATCGGAGTTGGAATATGTATATCTTTTGCGATCGGTGCACCTGCAATTGCTGGTCTATATACCATTCTTAGTCCACTAGGTAAAGATTATGATTCTGGATCGGACGAAGAATCACAGGTTCAAATTTCTGCTGCTCAAAAGCGAGAGCAAATGAGAGTGACATCATTTGAGAGGAAATATTCATTTGCATCAAAAGATCAACGAAGGACCGTCGTAAGTAGACCACAGTGGAGTGGAGGAATACTTGACATTTGGGACGATATATCTCAAGCATATCTATCACTTTTCTGTACTTTTTGTGTCTTCGGTTGGAATATGGAGAGACTTGGCTTTGGGAACATGTATGTTCACATTGCCACTTTTATGCTGTTCTGTATGGCTCCATTTTGGATTTTCATCCTAGCTGCTGTTAATATTGAGGATGACACCGTTAGGCAGGCTTTAGTAGGTGCTGGAATCGTTCTATGTTTTTTCGGCATGCTCTATGGTGGGTTTTGGAGAATCCAAATGAGAAAGAGGTACAATTTGCCTACTTATGACTTCTGTTGCGGCAAGCCTACAGTTTCTGATTGCGCACTTTGGCTATGTTGTTGTTGGTGCTCTCTTGCTCAAGAAGTACGGACAGGGGATGCCTATCATATTGTAGATGATAAATTCTTCAGCAAAGAAATTAACACTGTTGTTGACATACCACCAATTTCACCTTTGCATCGCGAAGGTGTTGCATTGAATAAATCTGGCACAAGTTCCCCTCTTGGTATCAATTCTTCTCCTTCTAAATTCAAACCGTCGAGTCCTCTAAGTTCTAGCAGTTTCTTTAGTCCAGATGGTCCACTATCTAGTGTAAAAGAAGAGGTTCCGGAAAAAGATAAAGATGTAACAATGAATCCGCCAACTCCACCATTGATACAAAGAGATTCTCCTTAG 1677 0.4103 MVSVDNNGKDVIEESNNNGSKMMELTSIDISSSRRTLVTGENPGRKFPGTLSSVPNRINFLKFGSASAKFRRLATQMDLASQSVPSPSSRSLKERFSGMFSKKLDWDSIKKMAIEWIRNPMNMALFAWILCVAISGAILFLVMTGMLNAAIPKKETRNAWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWNPTDIIKLRKEYCKNGTYKPHEWTHMMVVVILGHVNCFAQYALCGLNIGYKRSQRPAIGVGICISFAIGAPAIAGLYTILSPLGKDYDSGSDEESQVQISAAQKREQMRVTSFERKYSFASKDQRRTVVSRPQWSGGILDIWDDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGAGIVLCFFGMLYGGFWRIQMRKRYNLPTYDFCCGKPTVSDCALWLCCCWCSLAQEVRTGDAYHIVDDKFFSKEINTVVDIPPISPLHREGVALNKSGTSSPLGINSSPSKFKPSSPLSSSSFFSPDGPLSSVKEEVPEKDKDVTMNPPTPPLIQRDSP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03402 558 MobiDBLite consensus disorder prediction 498 558 - -
Tsu05g03402 558 Pfam Protein of unknown function (DUF2985) 115 193 IPR021369 -
Tsu05g03402 558 Pfam PLAC8 family 327 457 IPR006461 -
Tsu05g03402 558 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 326 458 IPR006461 -
Tsu05g03402 558 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 554 - -
Tsu05g03402 558 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 554 - -
Tsu05g03402 558 MobiDBLite consensus disorder prediction 498 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03402 Tsu-Chr5 45336211 45339032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03402 - - gmx:100795088 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01926 03 19947777 19949433 Tsu05g03402 05 45336211 45339032 ECH
Tsu05g03402 05 45336211 45339032 Tsu05g03402 05 45336211 45339032 ECH
Tsu03g01926 03 19947777 19949433 Tsu05g03402 05 45336211 45339032 PCT