Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01926 ATGAATCAAGTTGATAATGGGATTATAAATcccaaaaatgaaattgaagaatCTAATGGGAGTCAAGTAAAGGAGTTTGCTTCTATAGATATTTCGCATACTCAAAAAACAATCCCAACCAATGGAAACCTTCAACGGAATTTCCTCAAATTTGGTTCTGCATCTGCCAAATTCAAGCAGCTTGCTACTGAGAAAGATCAGATTTCACAGTCTGTGCCTTCTTCGCATTCCGATAGCCTAAAATCACGTTTTGGTACGATGTTCGGTCAGAAACTTGAGTGGAGTTCAGTCAAGAAAATATGCATGGAATGGATCAAAAACCCAATGAACATGGCCCTTTTCGCGTGGATAATCTGTGTCGCTGTTTCAGGTGCAATTCTGTTCTTAGTCATGACAGGAATGTTGAATAATGTGCTAAAAACTAAGTCTGAGAGGAACACATGGTTTGAAGTAAATAACCAAATACTAAATGCACTCTTTACACTTATGTGTCTGTATCACCATCCAAAGAGGTTCCACCATCTTGTTCTTCTGTGTAGATGGAGACCAAATGACATTTCAAGACTTAGAATGATTTACTGCAAAAATGGAACTTATAAGCCTCATGAATGGACACATATGATGGTAGTGATTATTCTCCTTCATGTTAACTGTTTTGCTCAATATGCACTTTGTAGTCTAAACTTAGGATATAAAAGGTCTGAGAGACCTGCTATTGGAGTTGGAATTACTATATCTGTTGCAATTGCGGCACCGGCAATAGCAGGATTGTACACTATTCTTAGTCCACTTGGGAAAGACTATAATGATTGTATGATGGATGAGGAATCACAGGTTCAAATTAGAGAAAAacaatttgagaaaaaatatgCATTCTCGTCTAAAGATCAACGAGGAGTTATAGAAAATAGACCAAGTTGGAGCGGAAGAATACTTGACATTTGGAATGATGTATCTTTATCATATCTCTCACTTTTCTGCACCTTTTGTGTGTTTGGATGGAACATGGAGAGACTTGGATTTGGAAACATGTATGTTCATATAGCTACTTTCATGCTGTTTTGTATTGCTCCATTTTGGATATTTGTATTGGCTTCTGTTAACATTGATGATGACAATGTTAGACAAGCTCTAGTAGCTTTTGGGATCattctttgtttttgtggttTACTCTATGGTGGATTTTGGAGGATTCAAATGAGAAAGAGGTTTAATTTACCTTCTTATGATTTCTGTTTTGGAAAACCTTCAGTTTCTGATTGTGCACTTTGGTTATGCTGTTGTTGGTGCTCTCTTGCACAAGAAGCTAGGACTGGGAATAGTTATGATCTCTTGGAAGATAAGTTATGTATGAAAGAAATTGATAGAGAAGATGTAGTTTCAACCAAATCTGGCACAAGTTCTTCTCTCGAAAGAGATATAGATGGAACAATGAATCCACCAATAGCTTTAGTAATACAAAAAGAAGGTTTTGTATAA 1479 0.3529 MNQVDNGIINPKNEIEESNGSQVKEFASIDISHTQKTIPTNGNLQRNFLKFGSASAKFKQLATEKDQISQSVPSSHSDSLKSRFGTMFGQKLEWSSVKKICMEWIKNPMNMALFAWIICVAVSGAILFLVMTGMLNNVLKTKSERNTWFEVNNQILNALFTLMCLYHHPKRFHHLVLLCRWRPNDISRLRMIYCKNGTYKPHEWTHMMVVIILLHVNCFAQYALCSLNLGYKRSERPAIGVGITISVAIAAPAIAGLYTILSPLGKDYNDCMMDEESQVQIREKQFEKKYAFSSKDQRGVIENRPSWSGRILDIWNDVSLSYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCIAPFWIFVLASVNIDDDNVRQALVAFGIILCFCGLLYGGFWRIQMRKRFNLPSYDFCFGKPSVSDCALWLCCCWCSLAQEARTGNSYDLLEDKLCMKEIDREDVVSTKSGTSSSLERDIDGTMNPPIALVIQKEGFV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01926 492 Pfam Protein of unknown function (DUF2985) 103 181 IPR021369 -
Tsu03g01926 492 PANTHER PLAC8 FAMILY PROTEIN-RELATED 49 459 - -
Tsu03g01926 492 Pfam PLAC8 family 307 437 IPR006461 -
Tsu03g01926 492 MobiDBLite consensus disorder prediction 1 20 - -
Tsu03g01926 492 PANTHER - 49 459 - -
Tsu03g01926 492 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 306 438 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01926 Tsu-Chr3 19947777 19949433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01926 - - mtr:MTR_3g072070 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01926 03 19947777 19949433 Tsu05g03402 05 45336211 45339032 ECH
Tsu03g01926 03 19947777 19949433 Tsu03g01926 03 19947777 19949433 ECH
Tsu03g01926 03 19947777 19949433 Tsu05g03402 05 45336211 45339032 PCT