Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03400 ATGGCCAATGTGGTGGAAGTGAAGGTTGGTTTACATTGTGATGAATGTATCAAGAAAATTCTCAAGGCCATCAAGAAGATTGAAGATATTGAGACGTATAACGTGGACAAACAATTGAACAAGGTCATCGTTACCGGAAACGTCACCGATGAAGAAGTGATTGGAGTTCTTCATAAGATTGGCAAGAATGCAACTGTGTGGGAAAATGTTCAAGAAAATGTTCAATGCTAA 231 0.3853 MANVVEVKVGLHCDECIKKILKAIKKIEDIETYNVDKQLNKVIVTGNVTDEEVIGVLHKIGKNATVWENVQENVQC 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03400 76 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Tsu05g03400 76 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Tsu05g03400 76 SUPERFAMILY HMA, heavy metal-associated domain 4 68 IPR036163 GO:0046872
Tsu05g03400 76 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 71 - -
Tsu05g03400 76 Gene3D - 2 68 - -
Tsu05g03400 76 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 71 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03400 Tsu-Chr5 45328094 45328941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03400 - - gmx:100782367 116.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01918 03 19892082 19892659 Tsu05g03400 05 45328094 45328941 PCT