Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01918 ATGGCTAATGTAGTAGAAGTCAAAGTTGGTTTGCACTGTGATGACTGTATCAAGAAAATACTCAAAGCcatcaaaaaaattcaagATATTGAAACGTATAACGTGGATACAAAGTTGAACAAGGTGATTGTTACAGGCAATGTCACAACAGAACAAGTCATCAGAGTTCTTCAAAAAATTGGAAAGAATGCAATTCCCTTTGAAGATGCACCTTAA 216 0.3287 MANVVEVKVGLHCDDCIKKILKAIKKIQDIETYNVDTKLNKVIVTGNVTTEQVIRVLQKIGKNAIPFEDAP 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01918 71 Gene3D - 2 65 - -
Tsu03g01918 71 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Tsu03g01918 71 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Tsu03g01918 71 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 70 IPR045181 GO:0046872
Tsu03g01918 71 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 70 - -
Tsu03g01918 71 SUPERFAMILY HMA, heavy metal-associated domain 4 67 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01918 Tsu-Chr3 19892082 19892659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01918 - - gmx:100812505 110.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01918 03 19892082 19892659 Tsu05g03400 05 45328094 45328941 PCT