Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03376 ATGCAAATAATGAAGCATCCAATCTCACCTTCTTCTTCCATTCTAAGAAGCAAAGTTCGGTTATCCCCTTACCTTTTCACCCTTCTAGCTTTCATCATCTTTGTTACTATTCTCTATGGTGAAGATTTCATGTGCATTTTTGGTCAACAACTCCAAAACTACTCTAACCAAGACAAACTCTACTCCACAAATGagaGGGTGAAGAAACAGATCAAAGTACCTTTTGCCGTGGGTAAAACAGAGGAAGGGTGTGATATATTTAGTGGAAAATGGGTTTGGGACGAGGTTGCTAGGCCATTGTACGAGGAATCAGATTGTCCGTACATACAACCACAGTTGACTTGCCAAGAACATGGGAGGCCTGACAAAGATTACCAACATTGGAGGTGGAAACCACACGGTTGTGATCTTCCTAAATTCAATGCGAGTTTGATGCTTGAAACACTTCGTGGAAAAAGGATGATGTTTGTCGGAGACTCTCTCAATCGTGGTCAATATGTTTCTTTTGTATGCCTTCTTCATCAACTCATTCCTGAAGATGCCAAATCCATGGAAACCTTTGATTCACTCACTGTATTCACAGCTAAGgaATACAATGCAACAATAGAGTTCTATTGGGCACCATTTCTACTAGAATCAAACTCGGACAATGCTGTTGTTCATAGGATATCTGATAGGATTGTAAGAAAAGGTTCAATCAATAAGCATGGTAGAAATTGGAAAGGTGTTGACATTTTAGTATTCAACACATATCTTTGGTGGATGACTGGCTTGGAGATGAAGATTTTacTTGGATCTTTTGATGATGAAGTAAAAGAGATTGTCACAGTTTCAACAGAGGATGCTTATCGTATGGCTATGAAAAGTATGCTTAGATGGGTGAGGTTGAACATGAATCCAAAGAAAACTAGAGTCTTTTTCACTAGTATGTCACCTTCTCATGGAAAGAGCATAGATTGGGGAGGTGAACCAGGAGGAAATTGTTACAATGAAAAAACTTTGATTAATAATTCAACATATTGGGGTTCAGATTGTAGAAAAAGTATAATGCAAGTGATTGGTGAAGTGTTAAGCAAAACAAAAGTTCCAATTACATTTCTTAACATCACACAACTCTCAAATTACCGCAAAGATGCACACACTTCAATATACAAGAAGCAATGGAACCCTTTAACTCAAGAACAATTAGCTAACCCTGTTAGCTATGCTGATTGTGTACATTGGTGTTTACCTGGTCTTCAAGATAATTGGAATGAACTTTTGTTTGCTAAGTTGTTTTATCcttaa 1287 0.3745 MQIMKHPISPSSSILRSKVRLSPYLFTLLAFIIFVTILYGEDFMCIFGQQLQNYSNQDKLYSTNERVKKQIKVPFAVGKTEEGCDIFSGKWVWDEVARPLYEESDCPYIQPQLTCQEHGRPDKDYQHWRWKPHGCDLPKFNASLMLETLRGKRMMFVGDSLNRGQYVSFVCLLHQLIPEDAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVVHRISDRIVRKGSINKHGRNWKGVDILVFNTYLWWMTGLEMKILLGSFDDEVKEIVTVSTEDAYRMAMKSMLRWVRLNMNPKKTRVFFTSMSPSHGKSIDWGGEPGGNCYNEKTLINNSTYWGSDCRKSIMQVIGEVLSKTKVPITFLNITQLSNYRKDAHTSIYKKQWNPLTQEQLANPVSYADCVHWCLPGLQDNWNELLFAKLFYP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03376 428 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 13 428 - -
Tsu05g03376 428 Pfam PMR5 N terminal Domain 83 136 IPR025846 -
Tsu05g03376 428 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 137 423 IPR026057 GO:0016740
Tsu05g03376 428 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 428 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03376 Tsu-Chr5 45116390 45120511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03376 - - gmx:100785571 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03376 05 45116390 45120511 Tsu05g03376 05 45116390 45120511 ECH
Tsu03g01906 03 19730139 19735603 Tsu05g03376 05 45116390 45120511 PCT