Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01906 ATGGCAACCTCATTCTCAGCAGCATCATCTCTCCTTAGAACAAAACCTCGTTTCTCTTCTCCTTCTTATCTCTTCACTTTCTTAGCTTTCATTCTCTTCTCAGCTCTCATCCTCAACACCCATGATTTCCTCTTCATCTTTCGACCACATCTCAAACTCCACCCAAAAACAGTACTCTTTTCAACACCTAATAATGAGTTGACTCAGTCCAACACTGTTCAAAATGCGGAGAAAACAGAGGAAGATAAAGAGTGTGATTTGTTCAACGGAAGGTGGGTTCGAGATGAGTTGACTCGGCCTTTGTATGAGGAATCGGAGTGTCCGTATATACAACCACAGTTGACTTGTCAAGAACATGGTCGGCCGGATAAGGAATATCGACGGTTGCGGTGGCAGCCTCACGGTTGCGATCTTCCCAAATTCAACGCAAGTTTAATGCTAGAAACACTTCGTGGGAAGAGGATGATGTTCATCGGAGATTCCCTCAACAGGGGTCAGTATGTCTCTTTGATATGCCTTCTCCATCATCTTATTCCCCAACATGCCAAATCTATGGAAACCTTTGATTCACTCACTGTCTTCACAGCCAAGGAATACAATGCAACAATTGAGTTCTATTGGGCACCTTTTCTTCTTGAATCAAACTCCGATAATGCTGTCATCCATAGGGTAACTGATAGGATTGTAAGAAAGGGTTCAATCAATAAGCATGGTCGTTATTGGAAAGGCGCAGACATTTTGGTATTCAACACCTATCTTTGGTGGGTAACTGGCTCCAAGATGAAGATATTGCTTGGTTCTTTTAAGGATGAAGTAAAAGAGATTGTTGAGTTGCCAACAGAGGAAGCTTATCGTATGGCTATGAAAAGTATGCTTAGATGGGTGAGAATGAACATTGATCCCAACAAGACTAGAGTTTTCTTCACCAGCATGTCACCTTCTCATGGAAAGAGTATAGAGTGGGGAGGACAAGAAGGAGGAAACTGCTACAATGAAACAACTCCAATTGAAGATCCTTCATACTGGGGATCTGATTCACTGAAAAGCATAATGCAAGTAATTGGAGAAGAGTTCAGAAAATCCAAAATACCTATAACATTTCTCAACATTACACAACTTTCCAACTACCGCAAAGATGCACATACATCAATCTACAAAAAGCAATGGAATCCATTGACTCCAGAACAATTAGCAAACCCTGCTAGCTACTCTGATTGTATACATTGGTGCTTGCCTGGACTTCAAGACACTTGGAATGAACTTCTCTTTGCAAAGCTATTTTATCCTTGA 1290 0.4132 MATSFSAASSLLRTKPRFSSPSYLFTFLAFILFSALILNTHDFLFIFRPHLKLHPKTVLFSTPNNELTQSNTVQNAEKTEEDKECDLFNGRWVRDELTRPLYEESECPYIQPQLTCQEHGRPDKEYRRLRWQPHGCDLPKFNASLMLETLRGKRMMFIGDSLNRGQYVSLICLLHHLIPQHAKSMETFDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVIHRVTDRIVRKGSINKHGRYWKGADILVFNTYLWWVTGSKMKILLGSFKDEVKEIVELPTEEAYRMAMKSMLRWVRMNIDPNKTRVFFTSMSPSHGKSIEWGGQEGGNCYNETTPIEDPSYWGSDSLKSIMQVIGEEFRKSKIPITFLNITQLSNYRKDAHTSIYKKQWNPLTPEQLANPASYSDCIHWCLPGLQDTWNELLFAKLFYP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01906 429 Pfam PMR5 N terminal Domain 83 137 IPR025846 -
Tsu03g01906 429 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 10 429 - -
Tsu03g01906 429 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 10 429 IPR029962 GO:0016413
Tsu03g01906 429 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 138 424 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01906 Tsu-Chr3 19730139 19735603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01906 - - gmx:100782397 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01906 03 19730139 19735603 Tsu03g01906 03 19730139 19735603 ECH
Tsu03g01906 03 19730139 19735603 Tsu05g03376 05 45116390 45120511 PCT