Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03337 ATGGGAAATAAAATGGTAACATACAACAAGTACAAAAGTTTTTTGTTCTTTATCAAAAAGTACAAGCTGACTGAGCTAGTTCCACCTGAGGACCTCAAGGAGGTTTTCTCCAAGTTTGCCGGAGGGGGATCTCACATGTCGGTAGAGCAGCTATATCGATTTCTTATTGAGCATCAAGGCGAGGAGAATTTCACCTTATCGGATTCAGAGAAGATTGTTGACAAGGTTTTGCAACTGAGAAGGACACATCAAGAAACAGTTCATGTTGATCAATATAGAGAAACGGAAATTACCCTCGATGATATCTTCCGATTTTTTCTCCTAGATGAATTCAACGGTCCTTTGAAAACCGAGGTACATCATGATATGAATGCtccattgtcacattatttcaTATATACAGGACACAATTCCTATCTTACTGGAAATCAACTGAGCAGTGATTGCAGCGAAGAGCCAATAATAAAGGCGTTGCAACGAGGCGTGCGTGTTATTGAACTTGATTTATGGCCAACTACTAATAAAGATGATATTAAAGTTGATCATGGatgGACTCTTACCAATCCTGTATCACCAATCAAATGTTTGGAGTCTATAaagaaatatggttttgttgcATCTCAATATCCAGTAATCATAACTATAGAAGATCATCTTACAGAAGAACTTCGAGCGAAATTCGCAGAAATGGCAACTCAAATATTTGGAGAAATGCTTTTTTATCCTCAACAAGCAGAATATTTAAGTTTAACAGAATTCCCTTCACCGGAATCATTGAAAAATCGAGTTATTATATCAACCAAACCTCCGAAAGAACGTTTTAAGTCCAACCGAATCAAGGACAATGGAAACTATCCTTCTCTAGATGGAAGTAGTGAATCATCAGAAGATGAATCATCAGGAAAGGAATCACCGGATACCACGATTGAAGTGGAGATTAAGAGCACGAATGGATGTGATCGCGATGAGGGAGACACGAGTTCATGTGAATGTGATCAAAGATTATCTCAAGAGTGTTCACCTGATTACAGAACTATAATAACAATTCATAATAAGAAATTCAAGGGTAGCTtgaaagataaattaaaaactgATGGTGAAGTTAGACGGTTAAGCTGGAGCGAAACAACCTTAGAAAAAGCTTCAGAATCCCACGGAACAGACATCATTAGGTTCACACAGAAAAATATCCTTAGGGTATACCCTAGGGCGACACGTGTCAAATCCACAAATTTCAAACCACATCTTGGGTGGATGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGGCTTGGAAAATCACTCTGGTTGATGCAGGGTATGTTCAGAGCAAATGGAGGATGTGGTTATGTGAAAAAACCTGAAATTCTAATGCAGAAACTTCAAAGTGACAATGAGTTTGATCCTAAAATGATAATGCCAGTGAAAAAGACATTAAAGGTAAAAATATACATGGGACATGGTTGGAGCTTAGATTTCAGTCCTACACATTTTGATATGTTTTCTCCACCAGACTTTTATACAAAGgtTAGTATTGTTGGTATGCCTGCTGATGTTGCAAAGAAGAAGACAAAGGTAATCATGGACAACTGGTTTCCTGTATGGGATGAAGAGTTTGAATTCCCTTTGACTGTTCCAGAGCTTGCTTTACTTCAGATACAAGTTAAGGACAAAGATCAAGGAGGAAAAGATGACTTTGCTGGTCAAACATGTTTGCCAATTTCAGAGCTAAAACTTGGTTTTAGATCAGTCCCTTTGTATAATGAAAAGGGAGAACAATTTAAATCTGTGAAGTTGTTAATGaggtttcaatttgaatga 1824 0.364 MGNKMVTYNKYKSFLFFIKKYKLTELVPPEDLKEVFSKFAGGGSHMSVEQLYRFLIEHQGEENFTLSDSEKIVDKVLQLRRTHQETVHVDQYRETEITLDDIFRFFLLDEFNGPLKTEVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALQRGVRVIELDLWPTTNKDDIKVDHGWTLTNPVSPIKCLESIKKYGFVASQYPVIITIEDHLTEELRAKFAEMATQIFGEMLFYPQQAEYLSLTEFPSPESLKNRVIISTKPPKERFKSNRIKDNGNYPSLDGSSESSEDESSGKESPDTTIEVEIKSTNGCDRDEGDTSSCECDQRLSQECSPDYRTIITIHNKKFKGSLKDKLKTDGEVRRLSWSETTLEKASESHGTDIIRFTQKNILRVYPRATRVKSTNFKPHLGWMYGAQMVAFNMQGLGKSLWLMQGMFRANGGCGYVKKPEILMQKLQSDNEFDPKMIMPVKKTLKVKIYMGHGWSLDFSPTHFDMFSPPDFYTKVSIVGMPADVAKKKTKVIMDNWFPVWDEEFEFPLTVPELALLQIQVKDKDQGGKDDFAGQTCLPISELKLGFRSVPLYNEKGEQFKSVKLLMRFQFE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03337 607 Gene3D - 23 115 - -
Tsu05g03337 607 Gene3D C2 domain 474 607 IPR035892 -
Tsu05g03337 607 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 268 IPR000909 -
Tsu05g03337 607 MobiDBLite consensus disorder prediction 295 310 - -
Tsu05g03337 607 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 471 IPR017946 GO:0006629|GO:0008081
Tsu05g03337 607 MobiDBLite consensus disorder prediction 271 310 - -
Tsu05g03337 607 Pfam C2 domain 480 581 IPR000008 -
Tsu05g03337 607 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 372 458 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tsu05g03337 607 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 476 606 IPR035892 -
Tsu05g03337 607 MobiDBLite consensus disorder prediction 280 294 - -
Tsu05g03337 607 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 268 - -
Tsu05g03337 607 SMART plcx_3 121 268 IPR000909 -
Tsu05g03337 607 SMART C2_3c 479 587 IPR000008 -
Tsu05g03337 607 PRINTS Phospholipase C signature 418 436 IPR001192 GO:0035556
Tsu05g03337 607 PRINTS Phospholipase C signature 573 583 IPR001192 GO:0035556
Tsu05g03337 607 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Tsu05g03337 607 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Tsu05g03337 607 PRINTS Phospholipase C signature 252 269 IPR001192 GO:0035556
Tsu05g03337 607 PRINTS Phospholipase C signature 397 418 IPR001192 GO:0035556
Tsu05g03337 607 Pfam Phosphoinositide-specific phospholipase C, efhand-like 29 75 IPR015359 -
Tsu05g03337 607 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 347 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tsu05g03337 607 SUPERFAMILY EF-hand 3 123 IPR011992 -
Tsu05g03337 607 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 607 IPR001192 GO:0035556
Tsu05g03337 607 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 607 - -
Tsu05g03337 607 CDD C2_PLC_like 477 607 - -
Tsu05g03337 607 ProSiteProfiles C2 domain profile. 458 589 IPR000008 -
Tsu05g03337 607 SMART plcy_3 343 459 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tsu05g03337 607 SUPERFAMILY PLC-like phosphodiesterases 121 460 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03337 Tsu-Chr5 44676593 44679919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g03337 2 607 Acyl Lipid Metabolism Gene Families AT2G40116 54.777 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03337 K05857 - gmx:100820253 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01860 03 19177296 19185583 Tsu05g03337 05 44676593 44679919 PCT