Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03331 ATGGGGAGGTTGTTTGTTGTTCATCTTGAAGGAAAGATCTATAGCTGTAAACACTGTAAAACCCCTCTTGCTGTTTTTGAAGATATTGTTTCAAAGGATTTCCAAAGCAGACATGGAAAAGCTTATCTCTTCCGTAAGGTCGCGAATGTTTCTATCGGAGAATCAGATGACAGGCTGATGATCACTGGGATGCATACTGTGGCTGACATTTTCTGTGTTGGTTGTGGATCGCACGTCGGTTGGACATATGTGACTGCTCATGAGAAAAGCCAGAAGTACAAAGAAGGAAAATCTGTTCTTGAACGGTTCAAAATGTCAGGTCCTGACGGAAACAATTATTGGGTTAGGCATGAAACACATGTTGGTGGAAGTGATGCAGATGATTCTTAA 390 0.4154 MGRLFVVHLEGKIYSCKHCKTPLAVFEDIVSKDFQSRHGKAYLFRKVANVSIGESDDRLMITGMHTVADIFCVGCGSHVGWTYVTAHEKSQKYKEGKSVLERFKMSGPDGNNYWVRHETHVGGSDADDS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03331 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 128 IPR039058 -
Tsu05g03331 129 PANTHER PROTEIN YIPPEE-LIKE 1 128 - -
Tsu05g03331 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 105 IPR004910 -
Tsu05g03331 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03331 Tsu-Chr5 44623269 44626475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03331 - - pvy:116111775 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03331 05 44623269 44626475 Tsu05g03331 05 44623269 44626475 ECH
Tsu03g01841 03 18946145 18948515 Tsu05g03331 05 44623269 44626475 PCT