Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01841 ATGGGGAGATTGTTTCTCATCAATTTGGAAGGTAGGATCTATACCTGCAAATTCTGTCGCACCCATCTTGCTTTATACGAAGACATCGTTTCCAAGACTTTCCACAGCAGACATGGGAAAGCTTATCTCTTCAATAAGGTCGTGAATGTTTCTCTTGGCGAAACTGAGGAGAGACCGATGATGACTGGGCTACATACCGTGGCTGACATTTTCTGTGTGGGTTGCGGATCAATTGTGGGTTGGAAATATGAGACAGCCCATGAAAAAGACCAGAAGTACAAGGAAGGAAAGTCTGTACTTGAACGGTACAAAGTCTCAGGTCCTGATGGTAGCAATTATCGGATCAACAATGGAGCACATGTTGGAGGAAGCGACGCAGATGATATATAG 390 0.4436 MGRLFLINLEGRIYTCKFCRTHLALYEDIVSKTFHSRHGKAYLFNKVVNVSLGETEERPMMTGLHTVADIFCVGCGSIVGWKYETAHEKDQKYKEGKSVLERYKVSGPDGSNYRINNGAHVGGSDADDI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01841 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 106 IPR004910 -
Tsu03g01841 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Tsu03g01841 129 MobiDBLite consensus disorder prediction 106 129 - -
Tsu03g01841 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Tsu03g01841 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01841 Tsu-Chr3 18946145 18948515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01841 - - gmx:100305552 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01841 03 18946145 18948515 Tsu03g01841 03 18946145 18948515 ECH
Tsu03g01841 03 18946145 18948515 Tsu05g03331 05 44623269 44626475 PCT