Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03280 ATGTCTGCTTATGGACATGAACATATGTATTCTACAAGGAGTCTCTCTGCTGGTTCTGAGATGAGGAGTAGTTTTGTGCTGGAATCAGGATTCTACATCACATCATTTTCTGCAACAATTTTCATTGCTGGATTTGCAGCTCTTGGAGTTTTATTAATCACTTTATTGGTTTCAATGGCAATGATGCTACAATCATGTCAAAATAACAATGCTGGAATTATTGAGCTTAGGAATATAAATGATGATTATAGTTATTGCAAAATTCAATCTCTACATGCTAAGCTCAATAATTTGGAACAACATAATGTTCCTAACATTTGTAAGGACCTAGCTATACAATATATCAAAAGTGGTCATTATGCTAGAGATTTGGATTTAACCAAATCTGTGATTATGGATTACTTCAATGGTGTTAAACCATCAGAGGATGGTTTTGATGTAGTGTTGATTGACATAGATGGCATTTTTCCATGGAATCCAAATTCTTCCAATTTGTTTCAAAGcACAATTAGCAATTGTACCTTAGAGGCAAAGAAGTTAAAGCTTATGCTTATGTTAAGATTATACATGAACCTTCAAGCTAGTGGCTGGTCTATAATTTTGTTATCAAGAGAAGCAGTAAAAGACCAAAATGTCACAATCAATTATCTTGTTGATGCTGGATTTAGAGATTGGTCTTCATTGATGATGAGAGATGGTGAAGATTCTACCAAAAGGAATGAGTATTTTTCTAAGAAGAGGAATGTGATAGAGACAAAGGGATTAAGAATAAAAGGATCTTCTAATTACATGTCAGCCAAACCACACAAAAGCGATACAGACACCAGAGATTCCGGCGTTACAATCGGAATCTTGAACGTGAAAACTACCGTTTCAACCTCCGTAATCTCAGTTGTTTCGACGTTCATCATTCATACTTTACCGATTCAAGACTCCAGAAATTCCTCTGATCGTGCGTTCGGAATCTACTTTAGCGATTCAAGACACAACAAATTCCTCTCGGAATCTGCGTTCTACAATCTTGAAAGGAAAACCACCATTTCAACTAGTCTGTTTCCCACGTTCATCGTTCATCTACTTTACCGATACAAGACACCATTCCTGTGGGTTCTAATCATCGGAATCTTGAACGCGTAA 1137 0.3615 MSAYGHEHMYSTRSLSAGSEMRSSFVLESGFYITSFSATIFIAGFAALGVLLITLLVSMAMMLQSCQNNNAGIIELRNINDDYSYCKIQSLHAKLNNLEQHNVPNICKDLAIQYIKSGHYARDLDLTKSVIMDYFNGVKPSEDGFDVVLIDIDGIFPWNPNSSNLFQSTISNCTLEAKKLKLMLMLRLYMNLQASGWSIILLSREAVKDQNVTINYLVDAGFRDWSSLMMRDGEDSTKRNEYFSKKRNVIETKGLRIKGSSNYMSAKPHKSDTDTRDSGVTIGILNVKTTVSTSVISVVSTFIIHTLPIQDSRNSSDRAFGIYFSDSRHNKFLSESAFYNLERKTTISTSLFPTFIVHLLYRYKTPFLWVLIIGILNA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03280 378 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 81 259 IPR005519 -
Tsu05g03280 378 Gene3D - 80 261 IPR023214 -
Tsu05g03280 378 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 14 259 - -
Tsu05g03280 378 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 14 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03280 Tsu-Chr5 44162827 44167338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03280 - - gmx:100802632 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03280 05 44162827 44167338 Tsu05g03280 05 44162827 44167338 ECH
Tsu03g01787 03 18342518 18345392 Tsu05g03280 05 44162827 44167338 PCT