Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01787 ATGACATCTTTTACTGCAACAATCTTTCTTGCTTCACTCGCCATTCTTGgaattttattaattactttGCTGGTTTCCTTGGCAATTATGCTGCAATCATGTCAAAGTAAAAACAGTGGAGTTATTGAACTTCAGAATATAAATGATTACTACAGTTATTGCAGGGTGCATTCTCTGCATGCTGAACTCAATAGCTTAGAAGGATATGATATTCCAAACATATGTAGAGATCTGGCTATACATTATATCAAAGGAGGTCAATATGCTAAAGACTTGAATTTAATCGTGTCTATGATTGATGATTACTTCAAGAGTCTAAGACCTTCGGAGAATGGTTTGGATGTAGTGTTGATCGATATAGATGACATTGTTCCTTCAAATCCTTATTCTTCCGATTTCTATCACAGGTTTCATAATGACAGCATTAGCAACTGTGTCAAAGAGGAAAAAGATGTAAAGCTCATGTTTGTTTTAAGATTATACATGACCCTTCAAACTAGTGGATGGTCTATAATTTTGTTATCAAGAGAGTCTGAAATATACCAAAATGCCACCATTAATCGTCTAGTTTCAGCAGGATTTAGAGATTGGTCTTCTTTGATGATGAGAGCACAAGATTCAGATTCTATCAAAGGGAATGAGTACTTTTCTAGGCAAAGAAGTGTGATACAGAAGAAGGGCTTCCATATAAAAAGTATTATAAGTAGCCATTTTGATGTATTGACCGCTCCAGATAATCGAATACGAAATTTTCTACTTCCAGGCCACGTATGCGACAAGTTTGAACATCAGATAGAGAGCATAGATACTGGACATTAG 819 0.3504 MTSFTATIFLASLAILGILLITLLVSLAIMLQSCQSKNSGVIELQNINDYYSYCRVHSLHAELNSLEGYDIPNICRDLAIHYIKGGQYAKDLNLIVSMIDDYFKSLRPSENGLDVVLIDIDDIVPSNPYSSDFYHRFHNDSISNCVKEEKDVKLMFVLRLYMTLQTSGWSIILLSRESEIYQNATINRLVSAGFRDWSSLMMRAQDSDSIKGNEYFSRQRSVIQKKGFHIKSIISSHFDVLTAPDNRIRNFLLPGHVCDKFEHQIESIDTGH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01787 272 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 8 264 - -
Tsu03g01787 272 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 8 264 - -
Tsu03g01787 272 Gene3D - 49 261 IPR023214 -
Tsu03g01787 272 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 50 254 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01787 Tsu-Chr3 18342518 18345392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01787 - - gmx:100793007 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01787 03 18342518 18345392 Tsu03g01787 03 18342518 18345392 ECH
Tsu03g01787 03 18342518 18345392 Tsu05g03280 05 44162827 44167338 PCT