Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03267 ATGGCTAAACTTAATCAACATGTTACTGAGTTTGAAAAAGTGAATGAGAAACTTACTGAGTTCGATAACTCGTTTGGTTTTCCTACTGAGTTTCCTTACGAGTTTGACTCGTTTGAAACTGAAAATAGTGATGAGGAAGATTTCTTTGCTGGTTTAACTCGTAGACTGAGTCAAACCTCTCTTAACGAAACTCGGAAGCAACTCAGTGCTCCCATTTTCAACAACGAAAAACCTGAGATTCATGAGAAGGTTCGAGTTATGGCTGGTTCACCTCAGTCAACGTTAGCCGGAATCGGAAGCTGGTCAGGTCGAAGCGGCGGGTCAAGCGACGGAAGTCCAAATGGTTCAACTCGTGTACCTTCGCCGACGACAATACCATTCTCCACCGGAAACGAAGCTTGGGAGGTTTTATACGCCGCTGCCGGTGAAGTCGCGAGGTTGAAGATGAACAACGAAGCTTCGTTGTTGGAGTTACAGAACAAAAGAGGAGTACTCGGTGGCCTTCCACCACCTATCACGGCGGAGAATCGCGCCGCAGCATTTTTCGGAAACCCAAATCCTTCTAATgtTCAGTATCATCAAGTGAAACAACAGTGTGATTCAATTTGGGGAAGACAAGCCCAAACTCAAGCCCAAGCCCGGGCTCAGGCCCAAGCCAAAGAAGCTAGTTGGTTGGCTCATCAGGTTCAGAACAGAGGATATGATTATGAAGGAATGAAATGCATGCGGGGTTTGCCTCGTTCAGCATGGCATTCACCTATGCAAGTTAAGCAGAACCAAAATAATCCGGGTTTTTTCACCGGGTCTGGGTCAAGACCCGTTTTACAAAATGGATCTGGTGTGAAAAGAGGATGTGGAGGAACAGGGGTGTTCTTACCTCGTCCATATGGGACCCCTCTTCCTGAATCACGCAAGAAAACAAGTTGTGCTCCTGTTTTGGTCCCAGCTAAGGTTATTCATGCTTTGAATTTGAACATTGATGATTTTAACGGTGGTAGACAACCTCGtttttcaaatgattttggTGTGGATTATGatgCATTATTGGCAAGGAGAAATGCACTTGTGATGCAGCAGAGATTAAGAATTCAAAGAGAAGAAGCAGCTAGTTATGAAAATCGTTTGCCTCAAGAATGGACTTATTGA 1146 0.4424 MAKLNQHVTEFEKVNEKLTEFDNSFGFPTEFPYEFDSFETENSDEEDFFAGLTRRLSQTSLNETRKQLSAPIFNNEKPEIHEKVRVMAGSPQSTLAGIGSWSGRSGGSSDGSPNGSTRVPSPTTIPFSTGNEAWEVLYAAAGEVARLKMNNEASLLELQNKRGVLGGLPPPITAENRAAAFFGNPNPSNVQYHQVKQQCDSIWGRQAQTQAQARAQAQAKEASWLAHQVQNRGYDYEGMKCMRGLPRSAWHSPMQVKQNQNNPGFFTGSGSRPVLQNGSGVKRGCGGTGVFLPRPYGTPLPESRKKTSCAPVLVPAKVIHALNLNIDDFNGGRQPRFSNDFGVDYDALLARRNALVMQQRLRIQREEAASYENRLPQEWTY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03267 381 MobiDBLite consensus disorder prediction 95 126 - -
Tsu05g03267 381 PANTHER TIP41-LIKE PROTEIN 22 381 - -
Tsu05g03267 381 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 22 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03267 Tsu-Chr5 43973734 43976311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03267 - - gmx:100816574 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01771 03 18179842 18181849 Tsu05g03267 05 43973734 43976311 ECH
Tsu04g01258 04 12734907 12737151 Tsu05g03267 05 43973734 43976311 ECH
Tsu05g03267 05 43973734 43976311 Tsu05g03267 05 43973734 43976311 ECH
Tsu03g01771 03 18179842 18181849 Tsu05g03267 05 43973734 43976311 PCT