Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01771 ATGGCAACAAAACAACATCTCTGGTCATCTCCAACTGAGTTCAACACCGAGTTCGCCTTCCCCTCCGAGTTCCCTTACGAGTTCGAACTATCTTCACCTGCTGTTGAATCCGTTACCTCAACAGACTCAACAGAAAACAGCGACGAAGAAGAAAACAACTTCTTCACTGGCTTAACTCAACGTTTAAGTCAATCCACTCTCCATGAGACTCGGAATCAACTCACCACAGAACCAATCAACACATGGAACAACAAACCAGAAACAAAATCTCATTCATTCAAAACTCGTGACGTGGCCGGTTCACCTCAGTCTATTCTGAGTGGAATCGGTAGCTGGTCAGGTCGTAGTAACGGCTCTGACGGTAGTCCTAACGGAAACTCCCGTGTTCCGTCACCAGTAACGGCGCCGTTTGTTGACCCTTGGGAAGTTATTTACGCTGCTGCAGGTCAAGTTGCAAGgttcaaaatcaacaacaatcaaGTGGGTCCCACACATGTTAACATGTTTCAGCAAGAAGTGAAAAAGAAGCAAGAGTGTGGTTCGGTTTGGGAAACGGATCGTGATTGGTTGATTCAACAACAACGGTTACTGATTCATAATAGAAGACGTGAACTTGGTTATGAAAGTGTTGCAAGATGTAACGTTAACGTTCCTTTGTCTTTTCAATCTCAGCAACAAAATCAACGGGTTCAATATGGACCCGGTGGATCTGGGTTTCGGGTTCCGGTTTCGGGTGGATCTACTGTGAAAAAGGTTTCTGGTGGAACCGGTGTGTTTTTACCTCGTCATTATGATAATAGTACTCCTACACCTTCAGATTCACGCAAGAAAACTGGTaaattccatttttaccctttaaGATTCTCTTAG 870 0.4287 MATKQHLWSSPTEFNTEFAFPSEFPYEFELSSPAVESVTSTDSTENSDEEENNFFTGLTQRLSQSTLHETRNQLTTEPINTWNNKPETKSHSFKTRDVAGSPQSILSGIGSWSGRSNGSDGSPNGNSRVPSPVTAPFVDPWEVIYAAAGQVARFKINNNQVGPTHVNMFQQEVKKKQECGSVWETDRDWLIQQQRLLIHNRRRELGYESVARCNVNVPLSFQSQQQNQRVQYGPGGSGFRVPVSGGSTVKKVSGGTGVFLPRHYDNSTPTPSDSRKKTGKFHFYPLRFS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01771 289 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 13 280 - -
Tsu03g01771 289 MobiDBLite consensus disorder prediction 75 133 - -
Tsu03g01771 289 MobiDBLite consensus disorder prediction 95 131 - -
Tsu03g01771 289 MobiDBLite consensus disorder prediction 31 52 - -
Tsu03g01771 289 PANTHER TIP41-LIKE PROTEIN 13 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01771 Tsu-Chr3 18179842 18181849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01771 - - mtr:MTR_3g069670 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01771 03 18179842 18181849 Tsu05g03267 05 43973734 43976311 ECH
Tsu04g01258 04 12734907 12737151 Tsu03g01771 03 18179842 18181849 ECH
Tsu03g01771 03 18179842 18181849 Tsu03g01771 03 18179842 18181849 ECH
Tsu03g01771 03 18179842 18181849 Tsu05g03267 05 43973734 43976311 PCT