Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03247 ATGGAAGATTCTTCTTACACTGGTTTACCTACTAGCCACTTGCTCGGTTCAGTTCCTGCTGTCATAGTTGAAGAAGATAAAACTACAAAACATGTGGTCCCtgattcaaaaatacaaatatatccTCCAGCCGCCAATGGAGGAGACAGAAGACCAGGAGGATATCAAACAATTAGCACTCCTACAGAAACCTTTGAACAACAGCCAACAAACAACTGGAGAGGATTTTTTAGTGTCTCGTCTTACTCACAGTATTTTGATGTAGATACAGATGCTGTTATGACCAGATTGATAAGTTCCTTGAATCCAGTTGGTGGTGACTTCTTCAGCAAGATAGATGCCAACCCTGATTTATATGGGCTTATATGGATCTCAACGACATTGGTTTTTGCACTTGCCTCGCTTGGAAATCTTGCCACATTCCTTATGCAAAAACATGGAGATAGCAGTACCGCATGGAGCTTTGATGTTAGCTATATGAATACAGCTGCATGGTCTATCTATGGTTATGCAATAGTTGTCCCAGTTGCATACTACTTCTTCCTTCAGTATATGGGTTCAAATGCTAGCCTTATAAAGTTTTGGTGCATGTGGGGATATTCCCTCTCCATTTTCATATTCTCTTCATTTTTGATGATAATTCCAGTTGAGATTCTACGGTGGATCATAACACTCCTTACTGGTGTTGCGTCAGCTAGCTTTGTTGCCTTAAACCTCAGGTCTTACATAGAAGGCAATGATCTTTCAGCAACAATTATTGCTGCATTTTTCTTACAAATAGGTTTGGCAGTCTTCATCAAGGCTTGGTTCTTTGCATAG 819 0.3944 MEDSSYTGLPTSHLLGSVPAVIVEEDKTTKHVVPDSKIQIYPPAANGGDRRPGGYQTISTPTETFEQQPTNNWRGFFSVSSYSQYFDVDTDAVMTRLISSLNPVGGDFFSKIDANPDLYGLIWISTTLVFALASLGNLATFLMQKHGDSSTAWSFDVSYMNTAAWSIYGYAIVVPVAYYFFLQYMGSNASLIKFWCMWGYSLSIFIFSSFLMIIPVEILRWIITLLTGVASASFVALNLRSYIEGNDLSATIIAAFFLQIGLAVFIKAWFFA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03247 272 PANTHER UNCHARACTERIZED 1 272 IPR039765 GO:0005794|GO:0016192|GO:0031267
Tsu05g03247 272 Pfam Yip1 domain 102 266 IPR006977 GO:0016020
Tsu05g03247 272 PANTHER PROTEIN YIPF 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03247 Tsu-Chr5 43771638 43776061 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03247 K22940 - gmx:100813483 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03247 05 43771638 43776061 Tsu05g03247 05 43771638 43776061 ECH
Tsu03g01748 03 17858929 17862702 Tsu05g03247 05 43771638 43776061 PCT