Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03240 ATGATACCCTTCATCAATTGCGATTCTTTCGCAACCACCGTCATCATCAAAATCGTGGCGCTCTTCACCGTCGCCATCACTTTCTTCTACATCGGAAAACACTGGTCCATCAACAACCAGCaactcatcttcttcaccaCAACAACAATATCCAATCAAGTCACCACATCCCCTAATTTCGACAAATTCTCCAACATCTCCGATATAATCAATCATaaccaaaccctaaaaacatcAGAGCCACTGAAAATCAAGAAATTAGGAGTCCTCAATGAGGACGGAACAATGTCTAATGAATTTGAGATTGGAGAATTTGATCCGGATTTTGTGGATGAGTCAGTTAACGCGACACGAGTTGATGATTCAAATGATGAATTGAAATTTGAAGTGAAGAAATTTGCGTTGTGTTCAAGTAACTTGAGTGATTATATACCGTGTTTGGATAATGTAGAGGCGATTGGGAAGCTGAAATCGGTGGAGAAAGGGGAAAGGTTTGAGAGGCATTGTCCTGTTATGGAGAAACGGTTTAATTGCTTGGTTCCGACACCTAAAGGTTACCGGTCTCCGATTCCATGGCCCAAAAGCCGCGACGAGGTGTGGTACAATAATGTTCCCCACATTCGTCTTGTGGAAGATAAAGGGGGTCAAAATTGGATTACCAGAGACAAGGATAAGTTTAAGTTTCCAGGAGGTGGTACCCAATTTATACACGGAGCAAATCAATACTTGGACCATATTTCTAAGATGGTTCCTAATATCACATTTGGTCAGAATATAAGAGTTGCACTTGATGTTGGCTGTGGTGTAGCTAGTTTTGGGGCATACTTATTGTCAAGAAATGTCATAACCATGTCCATTGCTCCCAAGGATGTTCATGAGAATCAGATCCAATTTGCTCTTGAGCGTGGTGTCCCAGCAATGATGGCAGCGTTTGCAACTAGACGTTTATTATATCCAAGTCAAGCTTTTGATTTGATACATTGTTCGCGCTGCAGAATTAATTGGACTCGAGATGATGGTATTTTGCTGCTTGAAATTAATAGGATGCTAAGGGCAGGAGGGTACTTTGTCTGGGCTGCCCAACCAGTTTATAAACACGAGCAAAATTTAGAAGAACAATGGCAAGAGATGCTTAATCTTACTACCCGTCTTTGCTGgaagtttttgaaaaaagatgGCTATGTTGCAATATGGCAGAAACCCTCCGACAATAGCTGCTATCTAAACCGTCAGGCAAAAACTAAACCTCCACTCTGTGACCCAAGTGATGACCCAGACAATATCTGGTATGTTAATTTAAAAGCATGCATCTCCCCATTGCCTGAGAATGGATATGGAGCAAATCTTACCAAATGGCCTGCACGTTTGCAAACTTCACCTGATAGGCTTCAAAGCATAAAACTTGATGCGTTCAAATCCAGAAAAGAGCTTTTTAAGGCGGAATCAAAATATTGGAATGAGATAATAGCATATTATGCACGTTGTTTACATTGGAAGACAATGCGATTAAGAAACGTTATGGACATGAGAGCTGGTTTTGGAGGATTTGCAGCTGCATTGATTAATCAAAATCTTGACAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGCTCAAACACCTTACCTGTGATATATGACCGTGGCCTGATTGGAGTTATGCATGACTGGTGTGAGCCATTTGACACTTATCCAAGAACCTACGATCTTCTGCATGCTTCAAACCTGCTTTCTGTTGAGAAGAAAAGATGCAACGTCTCATCAATCATGCTTGAGATGGATCGGATACTTAGACCTGGTGGAGTAGTATACATCGATGATGCTCTTTCTATCATGGATGAGCTTGTGAAGATTGCCAAAGCTATCGGCTGGCGAGCCGCATTGCGAGAAACAATTGAGGGTCCACATACAAGTTACAGAGTCTTGGTTTGTAATAAGGGCCTACCACCTGGTTGA 1953 0.4066 MIPFINCDSFATTVIIKIVALFTVAITFFYIGKHWSINNQQLIFFTTTTISNQVTTSPNFDKFSNISDIINHNQTLKTSEPLKIKKLGVLNEDGTMSNEFEIGEFDPDFVDESVNATRVDDSNDELKFEVKKFALCSSNLSDYIPCLDNVEAIGKLKSVEKGERFERHCPVMEKRFNCLVPTPKGYRSPIPWPKSRDEVWYNNVPHIRLVEDKGGQNWITRDKDKFKFPGGGTQFIHGANQYLDHISKMVPNITFGQNIRVALDVGCGVASFGAYLLSRNVITMSIAPKDVHENQIQFALERGVPAMMAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEINRMLRAGGYFVWAAQPVYKHEQNLEEQWQEMLNLTTRLCWKFLKKDGYVAIWQKPSDNSCYLNRQAKTKPPLCDPSDDPDNIWYVNLKACISPLPENGYGANLTKWPARLQTSPDRLQSIKLDAFKSRKELFKAESKYWNEIIAYYARCLHWKTMRLRNVMDMRAGFGGFAAALINQNLDSWVMNVVPVSGSNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHASNLLSVEKKRCNVSSIMLEMDRILRPGGVVYIDDALSIMDELVKIAKAIGWRAALRETIEGPHTSYRVLVCNKGLPPG 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03240 650 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 142 645 IPR004159 GO:0008168
Tsu05g03240 650 PANTHER METHYLTRANSFERASE PMT12-RELATED 7 646 - -
Tsu05g03240 650 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 480 625 IPR029063 -
Tsu05g03240 650 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 176 385 IPR029063 -
Tsu05g03240 650 Gene3D Vaccinia Virus protein VP39 240 408 IPR029063 -
Tsu05g03240 650 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 7 646 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03240 Tsu-Chr5 43681673 43686141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03240 - - gmx:100800414 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03240 05 43681673 43686141 Tsu05g03240 05 43681673 43686141 ECH
Tsu03g01740 03 17753365 17759525 Tsu05g03240 05 43681673 43686141 PCT