Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g03233 ATGGGAAATGTGAAGTTGCAAATTCATGCTGATATCAATGCAATGGAAGAGGAAGCTGGGCAGAGTGGTGCTGGAAATCCTAGCAGGACTACTGTGGCATGCATGATTAATGCAGAAATCGGTGCTGTTTTGGCTGTTATGCGAAGAAATGTTAGATGGGGTGTTCATTATATGTCAGATGATGATCAATTGGAGCACTCCCTTGTTCAGTCTTTAAAGGCATTAAGGCGGCAAATTTTTTCATGGCACAGTCAGTGGCATGTCATAAACCCTGTCATGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGATGAAACTGGTGCACCAATTACTGGTGTTGCTCTGTCGTCTGTTTACAAGATCTTAACTCTGGATGTAATTGATCAAAACACTGTCAATATTGGGGATGCCATGCACTTGGTAGTTGATGCTGTCACAAGTTGCAGATTCGAGGTGACCGATCCAGGATCCGAGGAAGTGGTATTAATGAAGATATTACAAGTTCTTCTGGCATGTGTGAAAAGTAAAGCATCTGTAATGCTGAGTAACCAACATATTTGCACCATAGTAAACACTTGTTTCCGTATTGTTCATCAAGCAGGAACCAAAAGTGAGTTGCTTCAGAGAATAGCACGGTACACAATGCATGAACTTGTTCGGTCTATTTTCTGTCACCTTCAAGACATAGATGTCACAGATCATGCATCGGAAAATGGGAGCACTGCTTTAAAAGAAGAGATTGATGGGCAAAAAAATGAGCATAATTCTGCAAACAGTCAATTGGAAAATGGTAGTTTGATTTCTGCAAGTGATAGTCAATCTGTATCCACAGGCATTGCTTCCAATACTTTGAGTGATGTGGCAGCAATAGTAGTGGATGTAAACACTGCTGCAAGCAGTGGCAAGGAGACTGATCCGAATGAACAGCTCATGAATGAACCGTATGGAATTCCTTGCATGGTGGAAATATTTCATTTCATGTGTTCACTTTTGAATGTTGTTGAGCATATGGGAATGAGTCCTCGATTAAATACAATTGCATTTGATGAAGATGTTCCTCTTTTTGCCTTAACTTTGATTAATTCGGCCATAGAGTTGGGAGGGTCTTCCTTTCACCGACACCCTAAGTTGTTGAGCTTAATTCAGGATGAATTATTCGGCAATCTTATGCAATTTGGTTTGTCAATGAGTCCCCTTGTACTTTCCATGGTAAGTAgcattgttttaaatttgtatcaCCATCTTCGTACAGAACTCAAGTTACAACTAGAAGCATTtttttcttgtgtaattttgaGGCTTGCACAAAGCAAATATGGGGCTTCATATCAACAACAGGAAGTAGCCATGGAGGCACTTGTTGACTTCTGCAGGCAAAAAGCATTCGTGGTGGAGATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATATCTTTGAAGacattgttaatttgttgtcCAAGAGTGCATTTCCTGTGAACAGTCCATTATCTACCATGAATATTCTTGCTTTGGACGGTCTTATTGCTGTCATACAAGGAATGGCTGAAAGGATAGGTAACGGGTCTTTGAGTTCAGAACATTCTATTGTGAATCTTGAAGAGTATACTTCATTCTGGCTTGAAAAGTGTGAAAATTTCACCGATCCAGATAATTGGGTTCCTTTTGTTGGTCGAAGAAAGCAATTCAAGAAAAGATTGATGATTGGAGCCGATCATTTTAATCGTGATACTAAGAAAGGTCTTCAGTTTCTCCAAGGAACACATCTTTTGCCGGACAAACTTGATCCCCAAAGTGTTGCCTTCTTTTTCAGATACACCACGGGGTTGGATAAGAATCTCATTGGTGATTACCTTGGAAACCATGATGAGTTCTGTGTTGACGTTCTTCATGAATTTGCTAGAACATTTGATTTCAAAGACATGGCATTAGATACAGCCCTGCGTATTTTTTTGGAGACTTTCAGATTGCCCGGTGAATCACAGAAGATCCAGAGGGTGCTTGAAGCTTTCTCAGAGAGATATTATGAGCAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTCTTGTTATCATATTCAATTATAATGCTTAATACAGATCAGCACAACTCACAGGTCAAAAAGAAGATGACAGAAGAAGATTTTGTCCGAAATAATAGGCGAATAAATGGTGGGAATGATCTACCCCGAGAAGTCCTGTCCGGACTATATCATTCGATTTGTAAAAATGAGATCCGGACAACCCCTGAGCAAGGTTCTACTTTTCCTGAAATGACTCCAAGTCGGTGGATATATCTCATACACAAGTCAAAAAGCACAGCTCCCTTCATTGTTTCTGATTGCAAAGCACACCTTGATTATGATATGTTTGCGATATTGTCTGGTCCGACAGTTGCTGCCATTTCTGTTGTATTTGACAATGCTGAAACTGAAGAGGTGTACCAAACATGTATGGATGGATTCTTAGCTGTTGCAAAGGTATCAGCTTATTATCATCTTGAGAGCATACTAGATGATTTGGTTGTGTCACTTTGTAAGTTTGTTACTATTTTGGATCCGTTATCTCCCGAGGAGTCAATTTTAGCCTTTGGAGAGGACATAAAAGCAAAAATGGCAACTGAGACTGTTTTCACTATCGCGAATCGGTATGGTGATTACATCCGCACAGGGTGGAGGGATATTCTTGATTGTATCTTAAAATTTCACAAGTTAGGTCTTCTTCCTGCTCAAATGGCCAATGATGCGGCCGAAGATTCAGAGCCTTCCACAGAAACAGAGAATGGGAAGCGTTATGCTAAATCTTTATCTTCATCTCAGCTTTTATCTGTTAATACTCCAAAGAGATCCTCAGGATTGATCAGCAGGTTTAGTCAACTCTTATATCTTGGCGAAGAGACAAAATCAGAGCCGACTGAAGAACAACTTGCTGCTCAGCAGAGTTCTCTTCAAACAATTCAGAAATGTCACATTGAGAGCATATTTACTGAGAGTAAGTTTTTGCAAGCCGACTCTCTATTGCACCTTGTTAAAGCACTCAAAAGCGCAGGCGTGAAGCCCAAGAAAGGATCCGAGGATGAAGATACTTCGGTTTTCTGCCTGGAGTTGCTGGTAGCAATCACTCTGAATAACAGAGATAGAATTGAACTTCTTTGGCCAGATGTTTATGAGCATATTTCCAATATTGTGCAATCAACTGTGATGCCTTGTACACAGGTAGAGAAGGCTGTTTTTGGACTCTTAAGAATTTGCCATCGCTTACTTCCCTACAAAGAGAACATTACCGATGAACTTTTGAAGTCCCTTCAACTTGTCCTGAAGCTTGATGCAAGGGTTGCTGATACATACTATGAACAGATTACGCAGGAAGTTAGTAATCTTGTGAAGGCAAATGCTTCTCACATTAGATCTCAGTTAGGATGGCGGACAATAACATCACTGCTTTCCATCACTGCTAGACACTTGGAATCATCCGAGGCTGGATTTGATGCATTGTTTTTCATTATGTCAGATGGAGCCCACATACTTCCAGCTAATTTTGTTCTCTGTGTAGATGCTGCAAAGCAATTTGCCGAGTCTCGAGTTGGACAGGTCGAGCGGTCTGTAGTGGCACTTGATCTATTGGCAGGGTCTATCAATTGTCTTGAGAAGTGGACTAATGATGCTAAGCAAGTAATGACAGAAGAAGAAGTGGCAAAGATGTTGCAGGATATTGGGGACATGTGGTTGAGGCTCGTACAGGGACTAAAAAAACTATGTTTGGACCAAAGAGAAGAGGTTCGAAACCATGCATTGTTATTGTTGCAGAATTGCTTAACAGGTTCAGTTGGAATTCATATCCCACATGACTTGTGGTTACAATGTTTTGATCAAGTGATCTTCACCGTGCTTGATGACCTACTTGAAATTTCTCAGACACAATCACCAAAGGACTACCGAAACATGGAAGGAACACTTGTTCTTGCCGTGAAGCTCTTGTCCAAAGTTTTCCTCTTGTTACTCCAAGACTTATCACAATCTACACACTTCAGCAAATTATGGTTGGGGGTGTTGAATcgttttgaaatatttatgaaGGTGAAAATTAGGGGAAGGAAAAGCGACAAGTTTCAAGAGCTTGTACCTGAGCTTCTCAAGAACACTTTGCTTGTTATGAAAGCAGGCAGTGTACTAGAACGAAGCAGTAGTAGTGGAGATGAAAACAGTTTATGGGAACTGACATGGCTGCATATAAATAACATCGCCCCATCGTTACAATCCGAGGTTTTCCCTGAGCAAGATTCTAAGCAATTGGAGCAGAAACAGACTGAACAAGTTGGAGATAGAGGGCCTGCTGAGAATGTTTCCCCGCCTTCAAATGAAACAGCAGGCGAAGATGGTTCTGGTAATGGTATTGGTTAA 4410 0.4029 MGNVKLQIHADINAMEEEAGQSGAGNPSRTTVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKALRRQIFSWHSQWHVINPVMYLQPFLDVIQSDETGAPITGVALSSVYKILTLDVIDQNTVNIGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVMLSNQHICTIVNTCFRIVHQAGTKSELLQRIARYTMHELVRSIFCHLQDIDVTDHASENGSTALKEEIDGQKNEHNSANSQLENGSLISASDSQSVSTGIASNTLSDVAAIVVDVNTAASSGKETDPNEQLMNEPYGIPCMVEIFHFMCSLLNVVEHMGMSPRLNTIAFDEDVPLFALTLINSAIELGGSSFHRHPKLLSLIQDELFGNLMQFGLSMSPLVLSMVSSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVAMEALVDFCRQKAFVVEMYANFDCDITCSNIFEDIVNLLSKSAFPVNSPLSTMNILALDGLIAVIQGMAERIGNGSLSSEHSIVNLEEYTSFWLEKCENFTDPDNWVPFVGRRKQFKKRLMIGADHFNRDTKKGLQFLQGTHLLPDKLDPQSVAFFFRYTTGLDKNLIGDYLGNHDEFCVDVLHEFARTFDFKDMALDTALRIFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALLLSYSIIMLNTDQHNSQVKKKMTEEDFVRNNRRINGGNDLPREVLSGLYHSICKNEIRTTPEQGSTFPEMTPSRWIYLIHKSKSTAPFIVSDCKAHLDYDMFAILSGPTVAAISVVFDNAETEEVYQTCMDGFLAVAKVSAYYHLESILDDLVVSLCKFVTILDPLSPEESILAFGEDIKAKMATETVFTIANRYGDYIRTGWRDILDCILKFHKLGLLPAQMANDAAEDSEPSTETENGKRYAKSLSSSQLLSVNTPKRSSGLISRFSQLLYLGEETKSEPTEEQLAAQQSSLQTIQKCHIESIFTESKFLQADSLLHLVKALKSAGVKPKKGSEDEDTSVFCLELLVAITLNNRDRIELLWPDVYEHISNIVQSTVMPCTQVEKAVFGLLRICHRLLPYKENITDELLKSLQLVLKLDARVADTYYEQITQEVSNLVKANASHIRSQLGWRTITSLLSITARHLESSEAGFDALFFIMSDGAHILPANFVLCVDAAKQFAESRVGQVERSVVALDLLAGSINCLEKWTNDAKQVMTEEEVAKMLQDIGDMWLRLVQGLKKLCLDQREEVRNHALLLLQNCLTGSVGIHIPHDLWLQCFDQVIFTVLDDLLEISQTQSPKDYRNMEGTLVLAVKLLSKVFLLLLQDLSQSTHFSKLWLGVLNRFEIFMKVKIRGRKSDKFQELVPELLKNTLLVMKAGSVLERSSSSGDENSLWELTWLHINNIAPSLQSEVFPEQDSKQLEQKQTEQVGDRGPAENVSPPSNETAGEDGSGNGIG 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g03233 1469 MobiDBLite consensus disorder prediction 1425 1469 - -
Tsu05g03233 1469 ProSiteProfiles SEC7 domain profile. 558 747 IPR000904 GO:0005085|GO:0032012
Tsu05g03233 1469 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 319 480 IPR032691 -
Tsu05g03233 1469 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1455 - -
Tsu05g03233 1469 SUPERFAMILY Sec7 domain 562 757 IPR035999 GO:0005085|GO:0032012
Tsu05g03233 1469 SUPERFAMILY ARM repeat 350 1335 IPR016024 -
Tsu05g03233 1469 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1455 - -
Tsu05g03233 1469 Pfam Sec7 domain 566 749 IPR000904 GO:0005085|GO:0032012
Tsu05g03233 1469 SMART sec7_5 562 749 IPR000904 GO:0005085|GO:0032012
Tsu05g03233 1469 Gene3D - 642 760 IPR023394 -
Tsu05g03233 1469 Coils Coil 241 261 - -
Tsu05g03233 1469 Gene3D - 559 641 - -
Tsu05g03233 1469 CDD Sec7 566 749 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g03233 Tsu-Chr5 43611962 43620246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g03233 K18443 - gmx:100784083 2410.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g03233 05 43611962 43620246 Tsu03g01731 03 17667711 17672775 PCT