Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02960 ATGCAACATCTTCTTGCATCTGATTTAGAATGGTGGTTCCATGGTCCTCCATGTCATCGTCACTATTTAGTCTCTTTACTCacaggttcatcatcatcttcatctcaAAAATCATTAGTTCCTAATCTCATAATTGGATTTGGATCAATTATTGTTGCTGAAGGGTATGATGAAAAAAACATGGTATGGTGGGTACATGCATGGTCTATTTCTAATGGAATCATTACTGAGGTTAGGGAGTATGTTAACACTTCGGTTACTGTTACTAAACTTGGTTTTCATTCAGAAGATGTTGTTGTTGGTTCAACTTTTAGGTGTATTTGGCAGAGTAAACTTTGTGATGACTCTGTTCCTGGACTCATTCTTACAATTTAG 375 0.336 MQHLLASDLEWWFHGPPCHRHYLVSLLTGSSSSSSQKSLVPNLIIGFGSIIVAEGYDEKNMVWWVHAWSISNGIITEVREYVNTSVTVTKLGFHSEDVVVGSTFRCIWQSKLCDDSVPGLILTI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02960 124 PANTHER OS07G0691300 PROTEIN 1 124 IPR009798 -
Tsu05g02960 124 SUPERFAMILY NTF2-like 2 92 IPR032710 -
Tsu05g02960 124 Pfam Wound-induced protein WI12 25 124 IPR009798 -
Tsu05g02960 124 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02960 Tsu-Chr5 39889415 39889789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02960 - - gmx:100792027 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02960 05 39889415 39889789 Tsu05g02960 05 39889415 39889789 ECH
Tsu05g02960 05 39889415 39889789 Tsu03g01925 03 19937545 19938960 ECH
Tsu05g02960 05 39889415 39889789 Tsu03g00817 03 7427794 7428291 ECH