Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01925 ATGCGCATGCTCACCGGTGATTCAAACGCTGTTGATACTTTCCGTTTTGTTCCGCAATCACTTGTTTCTTTTGGATCCATTGTTATTGTTGAAGGTTGTGATAATTCCCGCAAAATCTCTTGGGTTCACGCTTTGACTGTTGTGGATGGGATAGTCACTCAAGTTAGGGAGTATTTCAACACTTCCCTTACCGTCACACGCTTTGCCGGGAAAGAATCCGGTGAGATTGTGCCGGCGGTTACTGATTCCGGTCGTTTCCCTTGCGTTTGGGAAAGTAGCGTTTCCAATCGGGTCGGGAAATCTGTACCCGGTTTGGTCCTCGcgatataa 330 0.4667 MRMLTGDSNAVDTFRFVPQSLVSFGSIVIVEGCDNSRKISWVHALTVVDGIVTQVREYFNTSLTVTRFAGKESGEIVPAVTDSGRFPCVWESSVSNRVGKSVPGLVLAI 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01925 109 PANTHER OS07G0691300 PROTEIN 1 109 IPR009798 -
Tsu03g01925 109 Gene3D - 1 80 - -
Tsu03g01925 109 PANTHER SENESCENCE ASSOCIATED GENE 20 1 109 - -
Tsu03g01925 109 PIRSF Wun1 1 109 IPR016533 -
Tsu03g01925 109 Pfam Wound-induced protein WI12 1 109 IPR009798 -
Tsu03g01925 109 SUPERFAMILY NTF2-like 2 66 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01925 Tsu-Chr3 19937545 19938960 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01925 - - gmx:100813044 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02960 05 39889415 39889789 Tsu03g01925 03 19937545 19938960 ECH
Tsu03g00817 03 7427794 7428291 Tsu03g01925 03 19937545 19938960 ECH
Tsu03g01925 03 19937545 19938960 Tsu03g01925 03 19937545 19938960 ECH