Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02535 ATGGGACACTTATCAATCTTCTCCTTTACtttcatttctttcatttttctcttcctaACTCGCTACCACCAACTCGTTCATGCCGAGTCACCAACTCAGCCTCCTTATTCATGTGACATCACCAACCCACTTACAAAATCCTACCCCTTCTGCAATGTCAAACTTCCCATAGCTGAAAGAGCCAAAGACATCGTGTCGCGACTCACATTGGAGGAGAAACTCGCTCAGCTCGTTAACAAAGCTCCTTCTATTCCTCGACTCGGAATACCGAGTTACCAATGGTGGAGTGAAGCATTACACGGTGTTGCTGATTTTGGTTTCGGAATAAGATTAGGTGGAAATTTAAGAATTAAAGGTGCAACTATTTTTCCTCAAGTTATTCTCACTGCAGCTTCTTTTGATCCCCAACTATGGTACAAAATCAGTAAGgTGATTGGAACAGAAGCTAGAGGAATCTACAATGCTGGACAAGCAGAAGGGATGACATTTTGGGCACcaaacataaacatatttagGGACCCAAGATGGGGAAGAGGACAAGAAACAGCTGGAGAAGATCCTTTGGTAAATGCAAAGTATGCAGTTTCTTATGTGAGAGGACTTCAAGGTGATTCATTTGAAGGTGGGAAACTTATTGGAGATCGACTTAAAGCTTCTGCTTGTTGCAAACATTTTACTGCCTATGATTTGGATGATTGGAAGGGTATAGATCGTTTTGCTTTTGATGCCAAAGTAACTTTGCAAGATTTGGCTGATACATATCAACCTCCATTTCATAGTTGCGTACAACAAGGACGATCTAGTGGAATAATGTGTGCTTACAACAGTGTCAATGGTGTTCCAAACTGTGCAGATTATGATCTGTTAACCAATACTGcaagaaaaaaatggaatttcaATGGGTATATTACGTCGGATTGTGGAGCCGTAGATATCGTAAAAACAAGGCATGGTTACGCAAAAACACCAGAGGATGCTATAGCCGATGTACTTCAAGCTGGAATGGATGTAGAATGTGGTGATTACTTCACTAACCATTCAAAATCAGCGGTGTTACAGAAAAAAGTGCCTATATCTCATATCGACCGTGCCCTACGCAATCTATTCTCCATTAGAATAAGACTAGGCTTATTTGATGGAAATCCAACCAAACTCAAATATGGATCAATTGGTCCTAATCAAGTATGCTCTAAACAAAACCTAAACCTAGCTCTAGAAGCTGCAAGAAGTGGCATTgttcttttaaaaaacaatgCAAAAACTCTCCCACTTCCAAAATCAACAAATTCCATTGCAATTATAGGTCCTAATGCAAATTCATCATCACAAGTTGTTTTAGGAAACTATTTTGGTCGTCCTTGTAATTTGGTAACAATCAAAAAAGGCTTTGAGAGttatgctaagaacattgttTATCACTATGGATGTAGTGATGGAACAAAGTGTCTTAATGCTGAAATTGAGCAAGCAGTGGAAGTTGCTAAAAAAGTTGATTATGTTGTTTTGGTTATGGGATTGGATCAAAGTCAAGAGAGGGAATCACATGATAGAGATGATTTAGAGTTGCCAGGTAAACAACAGGAACTCATTGAAAGAGTTGCTAAAGCTTCTAAAAGGCCTGTTATTTTGGTGCTTTTGTGTGGTGGCCCTGTTGATATTAGTTTTGCTaagtttgatgacaaaattGGAGGGATTTTGTGGGCTGGTTATCCTGGTGAACTTGGTGGATTGGCTTTGGCTCAGATTGTGTTTGGTGATTATAATCCAGGGGGAAGACTACCAGTGACTTGGTACACAAAAGACTACATTAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCGTCATCTGGCTATCCCGGTCGAACCTACCGTTTCTACACCGGTCCAACGGTTTATGAATTTGGCTATGGTCTAAGCTACTCAAAATATTCCTACAACTTCATTTCTGTCAAAAATAACAACCTTCATATCAACCAATCATCCACTCATTCAATACTCGAAAACTCTGAAACAATCCGTTACAAACTTGTTTCGGAGATAGGCGAAGAAACATGTAAAGCCATGCCTGTTTCTGTCACATTGGGAGTTACAAACAATGGAAATATGGTTGGGAAACATCCTGTGTTGCTGTTTGTGAAACACGAGAAGGGAAGAAATGGAAATCCAGTGAAACAGTTGGTGGGTTTTGAGAGTGTGAAGGTGGAAGCAGGTCAAAGGGGTAAAGTTGGATTTGAAGTAAATGTTTGTGACCTTGTTAGTAGAGCAAATGAGAATGGTATTAAGGTGATTGAAGAAGGTGATTATTTATTGAGTGTGGGAGAGGAAGAGTACTCAATAAATGTTACTCTTTGA 2358 0.3813 MGHLSIFSFTFISFIFLFLTRYHQLVHAESPTQPPYSCDITNPLTKSYPFCNVKLPIAERAKDIVSRLTLEEKLAQLVNKAPSIPRLGIPSYQWWSEALHGVADFGFGIRLGGNLRIKGATIFPQVILTAASFDPQLWYKISKVIGTEARGIYNAGQAEGMTFWAPNINIFRDPRWGRGQETAGEDPLVNAKYAVSYVRGLQGDSFEGGKLIGDRLKASACCKHFTAYDLDDWKGIDRFAFDAKVTLQDLADTYQPPFHSCVQQGRSSGIMCAYNSVNGVPNCADYDLLTNTARKKWNFNGYITSDCGAVDIVKTRHGYAKTPEDAIADVLQAGMDVECGDYFTNHSKSAVLQKKVPISHIDRALRNLFSIRIRLGLFDGNPTKLKYGSIGPNQVCSKQNLNLALEAARSGIVLLKNNAKTLPLPKSTNSIAIIGPNANSSSQVVLGNYFGRPCNLVTIKKGFESYAKNIVYHYGCSDGTKCLNAEIEQAVEVAKKVDYVVLVMGLDQSQERESHDRDDLELPGKQQELIERVAKASKRPVILVLLCGGPVDISFAKFDDKIGGILWAGYPGELGGLALAQIVFGDYNPGGRLPVTWYTKDYIKIPMTDMRMRADPSSGYPGRTYRFYTGPTVYEFGYGLSYSKYSYNFISVKNNNLHINQSSTHSILENSETIRYKLVSEIGEETCKAMPVSVTLGVTNNGNMVGKHPVLLFVKHEKGRNGNPVKQLVGFESVKVEAGQRGKVGFEVNVCDLVSRANENGIKVIEEGDYLLSVGEEEYSINVTL 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02535 785 Pfam Fibronectin type III-like domain 710 776 IPR026891 -
Tsu05g02535 785 Gene3D - 398 643 IPR036881 GO:0004553|GO:0005975
Tsu05g02535 785 PANTHER SUGAR HYDROLASE-RELATED 1 784 IPR044993 GO:0009044|GO:0045493
Tsu05g02535 785 Pfam Glycosyl hydrolase family 3 N terminal domain 112 368 IPR001764 GO:0004553|GO:0005975
Tsu05g02535 785 Gene3D - 60 387 IPR036962 GO:0004553|GO:0005975
Tsu05g02535 785 PRINTS Glycosyl hydrolase family 3 signature 123 142 IPR001764 GO:0004553|GO:0005975
Tsu05g02535 785 PRINTS Glycosyl hydrolase family 3 signature 292 310 IPR001764 GO:0004553|GO:0005975
Tsu05g02535 785 PRINTS Glycosyl hydrolase family 3 signature 218 234 IPR001764 GO:0004553|GO:0005975
Tsu05g02535 785 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 1 784 - -
Tsu05g02535 785 Gene3D Immunoglobulins 672 784 IPR013783 -
Tsu05g02535 785 SUPERFAMILY (Trans)glycosidases 48 410 IPR017853 -
Tsu05g02535 785 Pfam Glycosyl hydrolase family 3 C-terminal domain 412 642 IPR002772 GO:0004553|GO:0005975
Tsu05g02535 785 SMART Fn3_like_2 708 778 IPR026891 -
Tsu05g02535 785 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 412 645 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02535 Tsu-Chr5 34516184 34523990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02535 25 785 Glycoside Hydrolase AT1G78060 61.911 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02535 - - gmx:100780688 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02535 05 34516184 34523990 Tsu05g02535 05 34516184 34523990 ECH
Tsu05g02535 05 34516184 34523990 Tsu03g02096 03 22128957 22136259 PCT