Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02096 ATGACCCTCTCAACTACCTTTACCTTTGTCACAATCATCTTCCTTTTTCTAACACTAACTCTCAACCCAGTTCTTACTCAATTACCTCCATTTGCTTGTGATTGGTCAAACCCATCAACAAGATCCTACCCATTTTGCAACCCAAAACTTCCCATCTTACAAAGAACAAGAGACCTTGTTTCTAGACTCACATTGGATGAAAAACTAGCTCAACTCGTTAACTCAGCTCCTCCTATTTCTCGACTCGGTATTCCTGGTTATCAATGGTGGAGTGAATCACTTCATGGAGTTGGTAATGTTGGTCGTGGTATCTTGTTTAATGGTACTATCTCTTCTGCAACTAGCTTCCCTCAAGTTATTCTTACTGCAGCTAGCTTCGATTCCCACCTCTGGTACCGAATCGGGCAGGCAATTGGAATTGAAGCAAGGGCAATATACAATGGAGGGCAAGCAATGGGGATGACATTTTGGGCAccaaacataaatatatttagggACCCAAGATGGGGGAGAGGACAAGAAACAGCTGGAGAAGATCCTCTGATGACTTCTAACTACGCTGTTTCCTATGTTAGAGGAATTCAAGGTGATTCCTTTCAAGGTGGTAAATTAAGGGGACACCTTCAAGCTTCTGCATGTTGCAAACATTTCACTGCCTATGATTTGGACAATTGGAAGGGTGTTAATCGCTTTCTCTTCGATGCTAAAGTGAGTTTGCAAGATTTAGCAGACACATATCAACCACCATTTCACAGTTGTGTAGAGCAAGGACGAGCTAGTGGTATAATGTGTGCTTATAACCGTGTAAATGGAGTTCCAAGTTGTGCTGATTACAATCTCTTAACTGAAACAGTTAGAAAACAATGGGAATTCCACGGGTATATTGTGTCAGATTGTGGAGCTGTTGGGCTCATACATGATGAACAAGGATATGCAAAATCTGCAGAGGATGCTGTAGCAGATGTTCTTCACGCTGGGATGGATTTGGAATGTGGAACTTATTTGACAGACCATGCAAAATCAGCAGTGGAGCAGAAAAAACTACATATAACACAAATAGACCGTGCCCTTCACAATCTATTTTCAATCAGAATGAGACTAGGCCAATTTGGTGGAAATCCAAACAAGCTTCCATTTGGTATGATTGGTCCCAACCATGTCTGTTCTGAAAATCACTTATATCTAGCTCTTGAAGCTGCAAGAAACGGCATTGTCCTTTTAAAGAACACTGCTTCACTTCTTCCACTTCCAAAAACAAGTCCCATTTCCTTAGCAGTGATAGGTCCTAATGCCAATGCTTCACCTTTAACACTTCTTGGAAACTATGCTGGCCCTCCTTGTAAATACATTACTATACTCCAAGGGTTTCGGCATTATGTTAAGGACGCTGTTTTTCATCCTGGTTGTGACGGTGGACCAAAGTGTGCTTCGGCACAAATAGACGAGGCAGTGAACGTTGCAAAGAAAGTGGATTATGTGGTTTTGGTTATGGGATTGGATCAAAGTGAAGAAAGGGAAGAGCGCGATCGCGTTCACCTTGATTTGCCAGGCAAGCAACTTGAACTCATTAACAGTGTTGCCAAAGCTTCTAAGCAACCTATTATTTTGGTGCTCCTTTGTGGTGGCCCTATAGATATTAGTTCAGCAAAATATGACAATAAAATTGGAGGTATCATTTGGGCTGGTTATCCGGGTGAACTTGGAGGCATTGCGCTCGCGCAAATTATTTTTGGTGATCACAATCCGGGAGGAAGACTACCAATTACTTGGTACCCAAAAGATTACATCAAAGTGCCAATGACAGACATGAGGATGCGAGCTGATCCCTCAACCGGCTATCCCGGAAGAACATACAGATTTTACAAGGGTCCTACTGTGTATGAATTTGGCCATGGACTAAGCTACACAAAATATTCCTACGAGTTTGTTTCCGTTACAGGTGACAAACTTCATTTCAATCAATCATCCGCTCATTTGATGGTTGAGAATTCAGAAACCATACGGTACAAATTAGTTTCAGAGTTGAGTGAAGAAACCTGCAAAAGCATGTCGGTCTCAGTCACAATTGGAGTTAAAAACCACGGAACCGTGGTGGGGAGACATCCTATATTGCTGTTTATGAGACCACGAAAACAGAGAATTGGAAGTCCTATGAAACAATTGGTTGGTTTTCATAGTTTGTTGTTAGATGCAGGGGAAATAAGCCATGTTGGATTTGAGCTCAGTCCTTGTGAGCATCTTAGTCGAGCGAACGAGGCTGGTTTAAAGGTCATAGAAGAAGGGTCTCATTTGTTACTTGTGGGAGAAGAAGAGTACTTAATAGATATCATTGTTTGA 2337 0.4155 MTLSTTFTFVTIIFLFLTLTLNPVLTQLPPFACDWSNPSTRSYPFCNPKLPILQRTRDLVSRLTLDEKLAQLVNSAPPISRLGIPGYQWWSESLHGVGNVGRGILFNGTISSATSFPQVILTAASFDSHLWYRIGQAIGIEARAIYNGGQAMGMTFWAPNINIFRDPRWGRGQETAGEDPLMTSNYAVSYVRGIQGDSFQGGKLRGHLQASACCKHFTAYDLDNWKGVNRFLFDAKVSLQDLADTYQPPFHSCVEQGRASGIMCAYNRVNGVPSCADYNLLTETVRKQWEFHGYIVSDCGAVGLIHDEQGYAKSAEDAVADVLHAGMDLECGTYLTDHAKSAVEQKKLHITQIDRALHNLFSIRMRLGQFGGNPNKLPFGMIGPNHVCSENHLYLALEAARNGIVLLKNTASLLPLPKTSPISLAVIGPNANASPLTLLGNYAGPPCKYITILQGFRHYVKDAVFHPGCDGGPKCASAQIDEAVNVAKKVDYVVLVMGLDQSEEREERDRVHLDLPGKQLELINSVAKASKQPIILVLLCGGPIDISSAKYDNKIGGIIWAGYPGELGGIALAQIIFGDHNPGGRLPITWYPKDYIKVPMTDMRMRADPSTGYPGRTYRFYKGPTVYEFGHGLSYTKYSYEFVSVTGDKLHFNQSSAHLMVENSETIRYKLVSELSEETCKSMSVSVTIGVKNHGTVVGRHPILLFMRPRKQRIGSPMKQLVGFHSLLLDAGEISHVGFELSPCEHLSRANEAGLKVIEEGSHLLLVGEEEYLIDIIV 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02096 778 Pfam Glycosyl hydrolase family 3 C-terminal domain 404 635 IPR002772 GO:0004553|GO:0005975
Tsu03g02096 778 Pfam Fibronectin type III-like domain 704 769 IPR026891 -
Tsu03g02096 778 Gene3D - 55 376 IPR036962 GO:0004553|GO:0005975
Tsu03g02096 778 SUPERFAMILY (Trans)glycosidases 43 402 IPR017853 -
Tsu03g02096 778 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 404 638 IPR036881 GO:0004553|GO:0005975
Tsu03g02096 778 Pfam Glycosyl hydrolase family 3 N terminal domain 109 360 IPR001764 GO:0004553|GO:0005975
Tsu03g02096 778 Gene3D - 390 636 IPR036881 GO:0004553|GO:0005975
Tsu03g02096 778 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 3 777 - -
Tsu03g02096 778 PANTHER SUGAR HYDROLASE-RELATED 3 777 IPR044993 GO:0009044|GO:0045493
Tsu03g02096 778 SMART Fn3_like_2 701 771 IPR026891 -
Tsu03g02096 778 Gene3D Immunoglobulins 663 775 IPR013783 -
Tsu03g02096 778 PRINTS Glycosyl hydrolase family 3 signature 116 135 IPR001764 GO:0004553|GO:0005975
Tsu03g02096 778 PRINTS Glycosyl hydrolase family 3 signature 210 226 IPR001764 GO:0004553|GO:0005975
Tsu03g02096 778 PRINTS Glycosyl hydrolase family 3 signature 284 302 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02096 Tsu-Chr3 22128957 22136259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02096 29 771 Glycoside Hydrolase AT1G78060 64.879 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02096 - - aprc:113867121 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02535 05 34516184 34523990 Tsu03g02096 03 22128957 22136259 PCT