Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01809 ATGGGCAATTCTAGCAACAATTTCCTTCAAGTTGTTCTAAAAAACTTCGATGTTCTTGCTCTgcCTTTGGTGACACTCGTTTATCCATTATATGCTTCAATCAAGGCCATAGAGACTAAGAATATTGCTGATGACCAACAATGGCTCACATATTGGGTTCTCTACTCTTTGATCACACTTTTCGAGCTTACATTTGCCAAACTTCTTGAACTGCTTCCAATTTGGCCTTATGCCAAGTTGATACTGAGTTGTTGGTTGGTTCTTCCTCACTTTAATGGGGCAGCATATGTTTATAGACACTATCTTAGACCATTCTACATGAACCCACAATTGCCAAAAATGCCGCAGATGCCGGGAACTTCCCAAATGTGGTATGTTCCACGGAAGAACATATTTAGTAAGCAAGACGATGTTCTAACTGCCGCTGAGAGATATATGCAAGAACACGGAACAGAAGCATTCGAAAGACTCATTACCAAGACTGACAGAGAAACTAGATCACGGAGGAGCGGAAACTACATGATCTTTGATGATGATTATAGATATTAA 549 0.3971 MGNSSNNFLQVVLKNFDVLALPLVTLVYPLYASIKAIETKNIADDQQWLTYWVLYSLITLFELTFAKLLELLPIWPYAKLILSCWLVLPHFNGAAYVYRHYLRPFYMNPQLPKMPQMPGTSQMWYVPRKNIFSKQDDVLTAAERYMQEHGTEAFERLITKTDRETRSRRSGNYMIFDDDYRY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01809 182 PANTHER HVA22-LIKE PROTEIN 5 181 - -
Tsu05g01809 182 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Tsu05g01809 182 PANTHER HVA22-LIKE PROTEINS 5 181 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01809 Tsu-Chr5 19496073 19500274 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01809 K17279 - gmx:100306464 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01809 05 19496073 19500274 Tsu05g01809 05 19496073 19500274 ECH
Tsu05g01809 05 19496073 19500274 Tsu04g03684 04 45883987 45886369 PCT