Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03684 atgggagGATCTGGATCTGGAGCCGGTAGTTTCTTTATGGTTCTTCTCAGAAATTTTGATGTTCTTGCTGgGCCTGTGATTAGTCTTGTTTATCCTTTATATGCTTCCGTTAGGGCAATTGAGAGCAAGTCTCCTGTGGATGATCAACAGTGGCTAACTTATTGGGTTCTGTATTCATTGATCACTCTTTTTGAACTTACTTTTGCCAAAATTCTTGAATGGATTCCTATATGGCCATATGCAAAGCTGATTCTAACCTGCTGGTTGGTCCTTCCTTATTTTACTGGCGCTGCTTATGTTTATGAGCATTATGTAAGACCCTTCTTGGCCAATCCTCAGACCATTAACATCTGGTATGTTCCAAGGAAAAAGGACGTCTTCTCTAAGCCAGATGACATCATAACTGCTGCAGAGAAGTACATCCAAGAGAATGGAACAGAAGCATTTGAGAATCTGATTCATAGGGCTGATAAATCAAAGTGGGGCGGTAGCCATCATACAATGTATGATGAGACTTATTGA 522 0.3985 MGGSGSGAGSFFMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFELTFAKILEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVRPFLANPQTINIWYVPRKKDVFSKPDDIITAAEKYIQENGTEAFENLIHRADKSKWGGSHHTMYDETY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03684 173 PANTHER HVA22-LIKE PROTEINS 7 163 IPR004345 -
Tsu04g03684 173 Pfam TB2/DP1, HVA22 family 32 108 IPR004345 -
Tsu04g03684 173 PANTHER HVA22-LIKE PROTEIN 7 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03684 Tsu-Chr4 45883987 45886369 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03684 K17279 - gmx:100808701 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03684 04 45883987 45886369 Tsu04g03684 04 45883987 45886369 ECH
Tsu05g01809 05 19496073 19500274 Tsu04g03684 04 45883987 45886369 PCT