Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01447 atGGAGTGCAAAACGAGAATAATATTCTCAGAACCCTTTGTTTCACACAGAAGAAAAGTGTTATCTGGTTTCACTTTAGGTCTTGTAGCTTCTCTTATTTTTCTCACACTTCTCTTCTTTAACTCTTCATTCAAATTTCCCAAACTACAACTCTCTTTTCAACGATCTCAATCCAATCTTAACTCTTCATGGCATTTCCCTTTTTCCACTctctctccttcttcttcttcttccaacaattcAATCACTCCTCTTAACACaattcatcaacatcaacaGAGTATGAAAACCCCTGAAGTAAATGTCTCAAATCAGGGTTTTAATAATACCCATTTGAGGAATGTTACTGAAGATTCAAAAGATCGTAATGGGGTTGATAAAGTTGGAAACTTGATTATTGGGAAAAATGAAGTGAATGTATCAAATGAGGTTTTTAACAATACCCATTTAGGGAATGTTACTGAAAATGCATTGGATCATGATGGGGTTGATAAAGTTGGAAACTTGTTTATTGGGAAAAGTGTAATTGATGGAATTGGAAATTCAAGTGAATCAGAGAAGAGGAATGAGAAAGTTGATTATGAAAAGTGTGATATATTTGATGGAAGTTGGGTTAAAGATGATTCAAAACCATATTATCCATTGGGTTCTTGTCCATTAGTTGATAGGGATTTTGATTGTCATCTTAATGGAAGACCTGATAGTGATTATGTGAAATGGAGATGGCAGCCAAATGGATGTGACATTCCAAGATTCAACGCAACGGATTTTCTGGAAAGGTTGCGAGGACAGAGGTTGGTTTTCGTTGGAGATTCACTGAACAGAAACATGTGGGAGTCCATGGTGTGTATTCTTCGTCAAAGCATCAAAGACAAGTCGCGTGTTTATGAAATTTCAGgaaaacatcaatttaaaaaGAAAGGTGTCTATGCTTTCCGATTTGAGGCAAGCTTctactacatctttgatatatatTTTCGGAGTATAAAACTTGATTATAATTGTTCAGTAGATTTTGTTAGTTCGCCATTCATTGTTCGAGAGTCAACTTTCAAAGGCGTAAATGGAACTTTTGAGACATTAAGATTGGATTTAATGGACCAGACAACTACCACATATCATGATGCTGAGATCATAGTCTTCAATACAGGACATTGGTGGACCCACGAGAAAACATCTAAGGGAGAAGACTATTATCAAGAAGGAAACCATCTATTCCCAAGACTCAAAGTTCTGGATGCCTATAGAAGGGCATTGACCACTTGGTCTAGATGGATTGACAACAATATCGATCCAAATCGAACACAGGTTTTCTTCAGAGGATACTCAGTTACTCATTTCAGGGGTGGGCAATGGAATTCAGGAGGACAGTGCCACAAGGAGACCGAGCCAATAAATAAAGGAGCACACTTACGGAAATATCCCTCAAAAATGAGGGTTCTAGATTATATCATCCCAAAGATGAAAACTCCAATTATGTATATGAACATAAGTAGGATGACAGATTACAGAAAAGACGGTCATCCTTCGATATACAGAATGGAATACAAGACAGAAGAAGAACGAGCAAATGCAGAACAACACCAAGATTGTAGTCATTGGTGCTTACCAGGAGTACCAGATACATGGAATGAATTACTCTATGCTTCTCTCTTAAAATATGGCAAAGGTCATTGGAAAAGCTGA 1686 0.3541 MECKTRIIFSEPFVSHRRKVLSGFTLGLVASLIFLTLLFFNSSFKFPKLQLSFQRSQSNLNSSWHFPFSTLSPSSSSSNNSITPLNTIHQHQQSMKTPEVNVSNQGFNNTHLRNVTEDSKDRNGVDKVGNLIIGKNEVNVSNEVFNNTHLGNVTENALDHDGVDKVGNLFIGKSVIDGIGNSSESEKRNEKVDYEKCDIFDGSWVKDDSKPYYPLGSCPLVDRDFDCHLNGRPDSDYVKWRWQPNGCDIPRFNATDFLERLRGQRLVFVGDSLNRNMWESMVCILRQSIKDKSRVYEISGKHQFKKKGVYAFRFEASFYYIFDIYFRSIKLDYNCSVDFVSSPFIVRESTFKGVNGTFETLRLDLMDQTTTTYHDAEIIVFNTGHWWTHEKTSKGEDYYQEGNHLFPRLKVLDAYRRALTTWSRWIDNNIDPNRTQVFFRGYSVTHFRGGQWNSGGQCHKETEPINKGAHLRKYPSKMRVLDYIIPKMKTPIMYMNISRMTDYRKDGHPSIYRMEYKTEEERANAEQHQDCSHWCLPGVPDTWNELLYASLLKYGKGHWKS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01447 561 Pfam PMR5 N terminal Domain 195 248 IPR025846 -
Tsu05g01447 561 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 11 559 IPR029962 GO:0016413
Tsu05g01447 561 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 11 559 - -
Tsu05g01447 561 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 249 549 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01447 Tsu-Chr5 13737889 13740925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01447 - - cam:101513224 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01447 05 13737889 13740925 Tsu05g01447 05 13737889 13740925 ECH
Tsu04g02526 04 28518213 28521904 Tsu05g01447 05 13737889 13740925 PCT