Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01080 ATGGCTTTTAACAACAAATTCAAGAAGACTAATTCACCTTCACATTTCAATTTCTGCCAAACCCTTTTCATCATTTCCTTCTTCACTATACCGACTTTTTTCCTCCTCAACAATTTCACCGCAAACTCCAAATGTACAAACCTTACCAAAACTTTTTCAGGTAATCTTCTTTCAGCTGATTTTGCATGGAACAGCCTCTCATTTTTACAACACAACCCTGCACCTATAGTTCTCAAAATTGCAGTCTTTTCTAGAAAATGGCCTAGCGGAACCGTTCCCGGTGGCATGGAACGCCATGCTCACACCCTTCATACCGCGTTAGCTCGCCGCGGACATCAAGTTCATGTCTTTACTTCCCCTTCAGAAGAtgaaacatcaacaacaacttcAATCTCGTCAAAAGGTTCGCCTTCTTCACCTTACATTCATTATCACGAAGGCGAGCCAGGTAAGTGGCGTTACAACAAAGCATGGGAACTTTTTCTCGAAGAAAACCAAAGAGATCAACCTTTTGATGTTGTTCATTCAGAAAGTGTAGCACTTCCTCATTGGCTAGCAAAAGAACTTCCAAATCTTGTTGTATCATGGCATGGCATAGCATTAGAAAGCTTGCAATCAAGCCTTTTTCAGGACTTGGCTCGTCTAGCAGACGAGCCAAGATCACAAGATTTTGAAAAAGGATTACAAGGGGTTGTCCCTAAGGTTCTAAATGAAATAAGATTCTTCCACAAATATTCTCATCATGTTGCTATTAGTGATAGTTGCGGCGAGATGTTAAGAGATGTTTACCAAATTCCAAGTAAAAGAGTTCATGTGATCCTCAATGGTGTCGATGAAGATGATTTCAGAGAAGATGTTGAATTAGGAAAAGAGTTTAGAACCAAAATTGGTATTCCAAGTAATGCTAGTTTAGTATTTGGAGTAGCCGGAAGATTAGTGAAGGATAAAGGTCATCCACTTCTTCATGAAGCATTTTCGCGGCTTATAACAAAACACACTAATATATATCTGATTGTAGCAGGTTCTGGACCATGGGAGAATAGGTACAAAGATTTAGGGAACCAAGTTCTTGTTCTAGGATCTATGAATCCTTCTATGTTAAGAGCATTCTATAATGCTATTGATATTTTTGTTAACCCTACGTTAAGACCACAAGGACTTGATCTTACACTAATGGAAGCTATGATGACAGGAAAGCCACTTTTGGCATCGAGGTTTCCAAGTATTAAAGGAAGTattattgttgatgatgaatttggTTATATGTTTTCTCCAAATGTGGAATCACTTCTGGAAGCACTTGAAGAAGTTGTAAAGGATGGTAAAGAGAGGCTAGAAAAGAGAGGAAATGCTTGTCGCGAATATGCAAATTCTATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGATTGTTCCTATGCATAAAAAGGGATACATTTTGTACCTACCCTTGA 1458 0.3772 MAFNNKFKKTNSPSHFNFCQTLFIISFFTIPTFFLLNNFTANSKCTNLTKTFSGNLLSADFAWNSLSFLQHNPAPIVLKIAVFSRKWPSGTVPGGMERHAHTLHTALARRGHQVHVFTSPSEDETSTTTSISSKGSPSSPYIHYHEGEPGKWRYNKAWELFLEENQRDQPFDVVHSESVALPHWLAKELPNLVVSWHGIALESLQSSLFQDLARLADEPRSQDFEKGLQGVVPKVLNEIRFFHKYSHHVAISDSCGEMLRDVYQIPSKRVHVILNGVDEDDFREDVELGKEFRTKIGIPSNASLVFGVAGRLVKDKGHPLLHEAFSRLITKHTNIYLIVAGSGPWENRYKDLGNQVLVLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMTGKPLLASRFPSIKGSIIVDDEFGYMFSPNVESLLEALEEVVKDGKERLEKRGNACREYANSMFTARKMALAYERLFLCIKRDTFCTYP 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01080 485 PANTHER GLYCOSYLTRANSFERASE 1 485 - -
Tsu05g01080 485 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 79 473 - -
Tsu05g01080 485 MobiDBLite consensus disorder prediction 117 140 - -
Tsu05g01080 485 MobiDBLite consensus disorder prediction 118 139 - -
Tsu05g01080 485 PANTHER GLYCOSYLTRANSFERASE 1 485 - -
Tsu05g01080 485 Pfam Glycosyl transferases group 1 304 447 IPR001296 GO:0016757
Tsu05g01080 485 Gene3D Glycogen Phosphorylase B; 301 460 - -
Tsu05g01080 485 Gene3D Glycogen Phosphorylase B; 77 300 - -
Tsu05g01080 485 CDD GT4_PimA-like 79 473 - -
Tsu05g01080 485 Pfam Glycosyltransferase Family 4 94 280 IPR028098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01080 Tsu-Chr5 9478560 9480017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01080 1 485 Glycosyltransferase AT4G19460 62.500 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01080 - - gmx:100817087 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01080 05 9478560 9480017 Tsu05g01080 05 9478560 9480017 ECH
Tsu05g01080 05 9478560 9480017 Tsu04g03053 04 37772750 37774219 PCT