Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01030 ATGCCTTCCCCCCATAACATTAACCAAGAACATCATGAGACTATTCATCATGATAATCATCCTCAATATCATCCTCACTTTCAATCTCCTCAATCTCATCATAGAACACCCAAAAAAAGACTAGTAACACATCAAAATGGTAACacacatttcttaatttggctAGCAGCAATTCTATGCACAATATTAGCCATAGGAGTTGTAATTGGAGGTGTTGTAGTCTTTGTTGGTTACATAGTAATTCATCCAAGAGTACCTACAATAAGTATATCAAATGCTCATTTAGATCTTTTCAGAAATGATTATGCTGGTCTTCTACAAACACAATTAAGCATATTTGTGAAGGCACAAAATGGTAATTTTAAGGCACATGCaacattttcaaatattaaattcAAACTTAGCTATCAAGGACAAGGTATAGCATATATGGTTGCTGACCCTTTTGATGTTCCTAAGAATAATTCAAAGGTTTTAGATTATGTTGTTCAATCTAATTCTATACCTTTAACTCCTGATCAAATGGTAGTAGTTGATCAATCATGGAAGAGAAATATTGTTGGATTTGATTTGAAAGGTGATGCTAGGACTCAATGGAgaattggaccttttggttcctTTAAATTTGGTTGTAAACTTGAATGTCAACTTAGATTTCATCCTTTGAATGGTAGTTATATTCCTTCAAGATGCACTTCTCAATCCAAATGA 711 0.3066 MPSPHNINQEHHETIHHDNHPQYHPHFQSPQSHHRTPKKRLVTHQNGNTHFLIWLAAILCTILAIGVVIGGVVVFVGYIVIHPRVPTISISNAHLDLFRNDYAGLLQTQLSIFVKAQNGNFKAHATFSNIKFKLSYQGQGIAYMVADPFDVPKNNSKVLDYVVQSNSIPLTPDQMVVVDQSWKRNIVGFDLKGDARTQWRIGPFGSFKFGCKLECQLRFHPLNGSYIPSRCTSQSK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01030 236 MobiDBLite consensus disorder prediction 16 39 - -
Tsu05g01030 236 Pfam Late embryogenesis abundant protein 114 215 IPR004864 -
Tsu05g01030 236 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 32 236 - -
Tsu05g01030 236 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 32 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01030 Tsu-Chr5 8983345 8984055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01030 - - cam:101493278 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01030 05 8983345 8984055 Tsu05g01030 05 8983345 8984055 ECH
Tsu05g01030 05 8983345 8984055 Tsu04g02746 04 31670595 31672490 PCT