Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02746 ATGGATTTGTTAGCGTCTGTGGAGCAATTAGCAGTTTATCTTGTGTTCAAATTCGACTACCAGAAAAGATATGTGAAGGTAGATTTAGCAAAAATAAGGGATCTTAATTGTCCCATATGCGATGATACTGAGCGGAAAAGTTCATCAGAAGCTGTCCAAAAAAACCTTCATAGAAGATTGGCTAAACCCATTGCAATACCACCTGATGATGGAGTGCGGAAAGCAGCGATTCTGGATAAGATCAAAAGGTTGAAGTTTTggctgaaaagaaaagattggCTGGTGAACCAAGCAAAAATGATGATATGGGTTTTTCTGTTAAGCATTGTTGTGGCTGCTTCTAATGGAAATGCAAAAGCTCATGCACAATTTTCTGAGATAACATTTAGACTTAGCTCTCAAGGTCAAGGAATTGATGTGCCCGTTGTTGATTCGTTCGTTGTGCCGAAAAATAGTTCAAACAATCTTCGATATGTTGTTCAATCATCAACGATACCGTTAACGCCTGAACAAATGAATGAAGTTGACACGTCTCAGAAAAGAAATGAAttagttttgattttaagggTGCTGCTAGGACTAGATGGAGGATAG 594 0.362 MDLLASVEQLAVYLVFKFDYQKRYVKVDLAKIRDLNCPICDDTERKSSSEAVQKNLHRRLAKPIAIPPDDGVRKAAILDKIKRLKFWLKRKDWLVNQAKMMIWVFLLSIVVAASNGNAKAHAQFSEITFRLSSQGQGIDVPVVDSFVVPKNSSNNLRYVVQSSTIPLTPEQMNEVDTSQKRNELVLILRVLLGLDGG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02746 197 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 102 188 - -
Tsu04g02746 197 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 102 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02746 Tsu-Chr4 31670595 31672490 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02746 - - gmx:100797168 102.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02746 04 31670595 31672490 Tsu04g02746 04 31670595 31672490 ECH
Tsu05g01030 05 8983345 8984055 Tsu04g02746 04 31670595 31672490 PCT