Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01022 ATGGAGATGGAGATGGAGAATAGTAATAgtgaaaaccaaacaaaaaagatCAATAGCTTTAGAAAGGGTAGCTTTAGAAAGGGAAGCTTTAGATTGGGAGGAAAAGATCAAACAGTGATTGAGTTAGGTAGTTTTGATACTCAAAGACTACTTTTAGAAGGGGGAGGTGGTGGAGGAATAAGAGAGAAACAAAAACTTcccaaaaatacactttctctTAGGCAAATGAAATCACTCACTGCTCTTGCTGATACCATCTTACCTTCTATCAATGATTTTGTTCCCGTCTCGCCTGACGACGAAGCCGCCGCTACTTTCTACCGTATTTCAGCTTCCATGGCTGGAACACCTGAGCGtCTTGGGGGTGTAATAAGTGAGAGATTAATTCACCCAATGACATGGTTATTAAAGTTTGTGTTATGGTTTCTGTCTACATGGATTGGAACAATAATTTTATGTGGCATGGGTTGCTTATCCACCAAGTTCCCTTTTATTCACACTTTCCCTGATTTGCCTCTTCACAAACGCCAACAAATTTTGCAATCCATGTCTCTTAGTTTCTTTCGTCTCCTTAGAATGTTCttcaaaacaattaaaattctCACTCTACGAGAATTCTTCTCTCAGCTAGATGAATCAGAAGACAATTGTTCATGGAAAGCAATTGGATACTGTGGACCTGATCCAGAATTCAAAGCTCAGATAAAGAGCCATTTTTTACATGGAACATCTAAAGGAGGACAAGATTCCGAGGAAGGCGTTGATGAAGCTGAACAAGCCATAGGACCTCTTTACAAAGGTCTCGTCCATCTCAACTATCCACGAGACATCACTGTCGATGCTTTAAGGCGATTTGGATTCCCTGTCTCGGTTAATCGTCGAAAGCCAAAAGTTGCTGCTAACTTGTCATCTCCTTCTTTAGTTATACAATGTGATGTTGTGGTAGTTGGTTCCGGCTCGGGAGGTGGAGTGGTAGCTGGAATTCTAGCAAAAGCTGGTTACAAAGTGTTGGTTTTGGAGAAAGGAGGCTATTCTGCTAGGAACAATCTTTCACTTCTTGAAGCACCAACCATGGATCAAATGTATGAATCTGGTGGTTTTGTGGCAACTGTTGATATGAGTGTACTTATATTAGCAGGATCTACTGTTGGTGGAGGGTCTGCAATCAATTGGGGTGCAAGCATCAAAACACCTCAGCATGTGTGCAAGGAGTGGTGTGAAAAACATGAACTAGAATTGTTTGAAAGTGAATTGTATCGAGAAGCGATGGATGCGGTTTGCGAGAAAATGGGAGTTCAAtctgagattgaagaggaaggttTCAACAATGCGGTTTTGAGAAAAGGGTGTCAAGAAATGGGATATCCTGTGAATAACATTCCAAGGAATTCTTCGTCGGATCACTACTGTGGATGGTGTTGTTTGGGGTGCAAGGATGGAAAAAAGAAGGGTACGTCAGAAACATGGTTGGTGGACTTGGTGAAATCTGGAAATGGAGCGATTCTTCCTGGTTGTACGGCGATGAAAGTTTTGCATAAGAAAAAGAAGGGAACTGGTCAAAAGACTGCGCGAGGAGTggtgtttgaatttgaatacaAAGGAAGTAAAGACATTTGTGTGGTAGAATCCAAGGTCACAATTGTAGCAAGTGGAACACTCAATACTCCATCATTGCTTAAAAGAAGCGgtttaaaaaataacaacataGGGAGAAACTTGCATCTCCATCCGGTGGTAATGGCCTGGGGCTATTTCCCAGATGCACCAGCAGAACCAACAGGTGCATCTGAAGTGTGGCCCGAGGCATGGAAAAAGAGCTACGAAGGAGGGATAATGACAGCAATGTCACCTGTTGTTGCAGAGTTTGACAAATCAGGATACGGAGCAGTGATCCAAACGCCTGCATTGCATCCCGGTACATTCTCGGTTGTCATGCCATGGGTTTCTGGAAGTGATATAAAAGATAGAATGCGAAAGTTTTCAAGAACAGCGCATGTATTTGCATTGGCAAGGGATCAAGGATCGGGAAAAGTGAAATCGCCAAGTCATATAAGTTATCAAATGGAAGATAGTGATGAAGAGAATTTACAGAAGGGAATTGATAAGGTACTGAGAATTCTAGCTGCAGCTGGCGCTGAAGAAATTGGAACTCATCATAACAAGGGAAATACCTTAAATGTAAAGCAGGCGAGTTATCATGAATTTGAGAAATTTGTTAAAGAGGAAAGTTCAAGGTCATTAACAGACCTTTCAACGCAGTTATGCTCGGCACATCAGATGGGGAGTTGTCGGATGGGATCTAATCCAAAGGAATCGGTGGTGAAGCAGACAGGGGAGACATGGGAAATGGAGGATCTTTATATAGCGGATGCAAGTGTCTTTCCTACAGCTTTGGGTGTGAATCCAATGATAACTGTTCAATCAATTGCTTACTGCACTGCACAATCTGTTCTTCAAGTTCTTAAAAGGAAAAGAAgtaagtga 2484 0.4022 MEMEMENSNSENQTKKINSFRKGSFRKGSFRLGGKDQTVIELGSFDTQRLLLEGGGGGGIREKQKLPKNTLSLRQMKSLTALADTILPSINDFVPVSPDDEAAATFYRISASMAGTPERLGGVISERLIHPMTWLLKFVLWFLSTWIGTIILCGMGCLSTKFPFIHTFPDLPLHKRQQILQSMSLSFFRLLRMFFKTIKILTLREFFSQLDESEDNCSWKAIGYCGPDPEFKAQIKSHFLHGTSKGGQDSEEGVDEAEQAIGPLYKGLVHLNYPRDITVDALRRFGFPVSVNRRKPKVAANLSSPSLVIQCDVVVVGSGSGGGVVAGILAKAGYKVLVLEKGGYSARNNLSLLEAPTMDQMYESGGFVATVDMSVLILAGSTVGGGSAINWGASIKTPQHVCKEWCEKHELELFESELYREAMDAVCEKMGVQSEIEEEGFNNAVLRKGCQEMGYPVNNIPRNSSSDHYCGWCCLGCKDGKKKGTSETWLVDLVKSGNGAILPGCTAMKVLHKKKKGTGQKTARGVVFEFEYKGSKDICVVESKVTIVASGTLNTPSLLKRSGLKNNNIGRNLHLHPVVMAWGYFPDAPAEPTGASEVWPEAWKKSYEGGIMTAMSPVVAEFDKSGYGAVIQTPALHPGTFSVVMPWVSGSDIKDRMRKFSRTAHVFALARDQGSGKVKSPSHISYQMEDSDEENLQKGIDKVLRILAAAGAEEIGTHHNKGNTLNVKQASYHEFEKFVKEESSRSLTDLSTQLCSAHQMGSCRMGSNPKESVVKQTGETWEMEDLYIADASVFPTALGVNPMITVQSIAYCTAQSVLQVLKRKRSK 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01022 827 MobiDBLite consensus disorder prediction 1 19 - -
Tsu05g01022 827 MobiDBLite consensus disorder prediction 1 20 - -
Tsu05g01022 827 Gene3D - 297 621 IPR036188 -
Tsu05g01022 827 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 28 827 - -
Tsu05g01022 827 Pfam GMC oxidoreductase 683 812 IPR007867 GO:0016614
Tsu05g01022 827 Pfam GMC oxidoreductase 312 578 IPR000172 GO:0016614|GO:0050660
Tsu05g01022 827 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 28 827 - -
Tsu05g01022 827 Gene3D - 742 825 IPR036188 -
Tsu05g01022 827 SUPERFAMILY FAD/NAD(P)-binding domain 309 818 IPR036188 -
Tsu05g01022 827 PIRSF Lg_Ch_AO 60 827 IPR012400 GO:0046577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01022 Tsu-Chr5 8863249 8872206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01022 35 821 Acyl Lipid Metabolism Gene Families AT4G19380 55.964 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01022 K17756 - gmx:100775376 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01022 05 8863249 8872206 Tsu05g01022 05 8863249 8872206 ECH
Tsu05g01022 05 8863249 8872206 Tsu04g02739 04 31533447 31540202 PCT