Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02739 ATggagaacaacaacaacaatagagAGAGTTATAGCAGAAGTAGTAGTTTGAGGTTGGGTTTGGGAATGAATGAAGCAAAAATTCACACTGTTGTTGAGCTTGGTGGGTTTGAAACAAAGAGCACAAAGAGTCTTCTTTGTGATGATTTTGAAGAGAGTgaaaaacaacatcatcaacagaAAAAACAATTACCTCTTAAAAATTCTCTATCTTCTAGACAAATGAAATCCTTAGTTTCTCTTTGTGATACTATTTTACCTTCCGTCATAGACAACAACGTTGTTTCTTCCTTTGATGAATCTGTCGACAACTTCTACCGTACTTCTGCTTCCATGGCTGGCACACCTGAACGTGTTGCAAATTTGTTGAGTGAGAAATTGAATCACCCAAGTACGAAGTTATTTACCTTGACATTATGGCTACTATCAACATGGTTTGGTACATTGATTCTGTGTGGTATTGCAAGTCTCTCAACGAAATTTCCCTTCGTCCTTAGCTTCTCTGAGTTGTCTTCGGAGAAACGCCAAAAAGTAATGCAGTCTTGGTCTGCAAGTTACTTTCGACTCCTTAAAATGTTATTCAGAACTATAAAGCTTCTCACACTCCTCGTCTTCTTTACTCAGCtagatgaagaagaaaacaacCCATCATGGAAGGCAATTGGATACAGTGGACCTGATACAGAGTtcaaggagaagaagaaaacttTACACCAAACATCCAAAGAAGAAGACGATGAAGAGGTTTTTGGACCTCTTTACAAAGGCCTTGTCCATTTGAACTACCCGCGTGATATCTTTTCGGATTCTCTAAGACGATTCGGATTCCCTGTATCTGTGACTCCTCCAACGAATAAAGCTTCTACCATCTCATCTCCTTCTCTAGTTATCCAATGTGATGCCGTCGTTGTTGGTTCTGGCTCAGGGGGTGGAGTGATAGCAGGAGTTCTAGCAAAAAGTGGTTATAAAGTGTTGGTATTGGAAAAAGGAAACTACATTGCTAGGAAAAATCTTTCTCTTCTTGAAGGACAATCCCTTGATCAAATGTACCTATCTCATGGTTTGATAGCTACGGATGATATGTCGGTACTAGTACTAGCAGGTTCCACAGTTGGTGGAGGGTCTACAATCAACTGGTCAGCCAGCATCAAAACTCCTAACCATGTATGCAAGGAGTGGTGCGATCGGCATGAGCTAGAACTGTTTGAAAGTAAATTATACAAAGAAGCAATGGATGTTGTGTGTGAGAAAATGGGAGTCCAATCTGATTTTGACGACGAAGGATTTAACAATGCAGTACTAAGAAAAGGGTGCAATGAAATGGGGTATCCTGTTAGTAACATTCCTAGGAATGCTCGATCGGATCACTATTGTGGTTGGTGTTTTATGGGATGTAAGGATGGAAAGAAGAAGGGTACATTAGAGACATGGCTTGTAGACTTGGTGAAATCGGGTAACGGAGCAATTATTCCTGGTTGTGAGGTTATACAAATCTTACACGGAGAAAAGAAAGGAAGAGACGGAAAAATAGCAAAAGGAGTGGCTTTTGCAATTGATTACAATGGAAAAAAGGAAATTTGTGTGGTGGAGTCTAAGGTCACAATTGTAGCCTGTGGCGCACTAAGTACTCCGCCGTTACTCAAAAGAAGTggtttgaaaaatgaaaacataGGGAAAAACTTGCATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCTGATGCACCTGAGTTATGGCCAGAGGAACATAAGAAAAGCTACGAAGGAGGGATTATGACAGCAATGTCTACAGTTGTTGCAGACTTTAACAGATCTGGATATGGTTCGGTGATCCAAACACCTTCATTGCATCCAGGCTTATTCTCAATTCTAATGCCGTGGAGTTCTGGAACCGATATAAAAGATCGAATGCGCAAATTTTCGaggacagctcatgtatttgcATTGGCAAGGGATCAAGGATCAGGAACTGTGGTGGATTCACCTAACATTATAAGTTATCAGATGACAGATGTAGACAAAGATAATTTAAGAAAAGGCATTGAGAAGGTGCTTAGAATATTGGCAGCAGCCGGAGCCGAGGAAATTGGGACACATAATAATAAGGGAAGGAGCTTAAAGGTTAAGGAAGTGAGCTATCATGAATTTGAGAAATTTGTTAAGGAAGAAAGTTTAATGTCATTTACTGACCTTTCGACACCAGTATGCTCGGCACATCAGATGGGGAGCTGTCGTATGGGTACTAACCCAAAGGAATCAGTTGTGAACCAAATGGGGGAAACATGGGAAGTTGAAGGTCTTTATCTTGCTGATTCAAGTGTTTTTCCCACAGCTTTGGGTGTGAATCCAATGGTCACAATTCAAGCTATCGCATATTGCACGGCACAACATGTTCTTGAAGTTCTCAAAAGGAAAAGATGA 2424 0.3886 MENNNNNRESYSRSSSLRLGLGMNEAKIHTVVELGGFETKSTKSLLCDDFEESEKQHHQQKKQLPLKNSLSSRQMKSLVSLCDTILPSVIDNNVVSSFDESVDNFYRTSASMAGTPERVANLLSEKLNHPSTKLFTLTLWLLSTWFGTLILCGIASLSTKFPFVLSFSELSSEKRQKVMQSWSASYFRLLKMLFRTIKLLTLLVFFTQLDEEENNPSWKAIGYSGPDTEFKEKKKTLHQTSKEEDDEEVFGPLYKGLVHLNYPRDIFSDSLRRFGFPVSVTPPTNKASTISSPSLVIQCDAVVVGSGSGGGVIAGVLAKSGYKVLVLEKGNYIARKNLSLLEGQSLDQMYLSHGLIATDDMSVLVLAGSTVGGGSTINWSASIKTPNHVCKEWCDRHELELFESKLYKEAMDVVCEKMGVQSDFDDEGFNNAVLRKGCNEMGYPVSNIPRNARSDHYCGWCFMGCKDGKKKGTLETWLVDLVKSGNGAIIPGCEVIQILHGEKKGRDGKIAKGVAFAIDYNGKKEICVVESKVTIVACGALSTPPLLKRSGLKNENIGKNLHLHPVTMAWGYFPDAPELWPEEHKKSYEGGIMTAMSTVVADFNRSGYGSVIQTPSLHPGLFSILMPWSSGTDIKDRMRKFSRTAHVFALARDQGSGTVVDSPNIISYQMTDVDKDNLRKGIEKVLRILAAAGAEEIGTHNNKGRSLKVKEVSYHEFEKFVKEESLMSFTDLSTPVCSAHQMGSCRMGTNPKESVVNQMGETWEVEGLYLADSSVFPTALGVNPMVTIQAIAYCTAQHVLEVLKRKR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02739 807 Gene3D - 285 614 IPR036188 -
Tsu04g02739 807 PIRSF Lg_Ch_AO 55 807 IPR012400 GO:0046577
Tsu04g02739 807 Pfam GMC oxidoreductase 666 794 IPR007867 GO:0016614
Tsu04g02739 807 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 34 807 - -
Tsu04g02739 807 Gene3D - 728 806 IPR036188 -
Tsu04g02739 807 SUPERFAMILY FAD/NAD(P)-binding domain 297 801 IPR036188 -
Tsu04g02739 807 Pfam GMC oxidoreductase 300 566 IPR000172 GO:0016614|GO:0050660
Tsu04g02739 807 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 34 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02739 Tsu-Chr4 31533447 31540202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02739 40 803 Acyl Lipid Metabolism Gene Families AT4G19380 58.431 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02739 K17756 - gmx:100778208 1225.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02739 04 31533447 31540202 Tsu04g02739 04 31533447 31540202 ECH
Tsu05g01022 05 8863249 8872206 Tsu04g02739 04 31533447 31540202 PCT