Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00804 ATGGTGTCAACGCCACCGTCGTCGTATCTGACGCCGACACAGAGATATGCAGCCGGAGCCTTAATGGGCCTGGCTCTACACCAAGCACAGCTTCATCAGACTCATCCACTAGGTCTTTCAACCGATGAATTTCCTTCTCCGAGTAGTTCCAAAACCGGTGCGGTTTCCGAAGATCCTGACCTTTGGGTTCATCACACCTCCGGTTTGCTTCGCCCCATTTTCATATTTCTTGATATTGATTCTGGTGCATGGTCTGGACTTGAAGAAACTTCTGGGTCTTCTTTGGCTACACGTCATGTTGGACCATTCTTGAGACTATTGTCAgaagaatatgatgatgataatgcTAAAAGGTTAGATCAAGAACTTGCTTTGTCGGAAGCAGTTGATGCTTTGGTTCTTAGCTTGGAAAAAAATTCAGAGTCATCGAggtcaaaaagagagaaatcgCTTGAATACGAGCATCAATGTCGTGAGAAGATTTCGACTGCTGATGTTCAACCAAACTCTGAGAAGGTAGAAATGCATTTGGAAAGTAAGCAGGAGGAAGATAATCTTTTCTTTGAATGTAAAGGAGACCCACATCAGGGATCTTCTAACAGTAAGACTAATGAGGGTCCAGATGAAACTAATGAGGGTCCAGATGAAGAGTTAATGAAGCTCAGCTATCAGAGGAAAGTGACAGTTCTCTACGAACTTCTCGCTGCTTGTTTGTCAGATTTAGGTGAAAAAGACACAAAATATACGCGGAGAAGAAAGGGATACGATGCTCGACATCGTGTGGCTCTACGATTGCTTGCAACTTGGCTTGATATCAAGTGGTCAAAAATGGAGGCTGTTGAGATGATAGTTTCTTGTTCTGCAATGGCTATCGTTAAAGAGCAAGAATCAAATAAAGAAGAAACACAATCAAAAGAAAGCGGCTGGGAAAAATGGAAGCGGAATGGTATTATTGGTGCTGCAGCATTAACTGGGGGAACTTTGATGGCTATTACTGGTGGATTAGCTGCCCCAGCAATTGCTGCAGGACTTGGTGCTTTGGCTCCAACTTTAGGTACTTTGATCCCTGTAATTGGAGCAGGTGGATTTGCAGCAGCTGCTAGTGCTGCAGGAACCGTTGCTGGTTCTGTTGCTGTTGCTGCCTCCTTTGGAGCTGCTGGAGCAGGACTTAGCGGAACCAAAATGGCTAGGAGAGTCGGGAGTGTTGACGAATTTGAATTCAAAACTATAGGAGACAACCATAACCAAGGCAGGCTGGCGGTTGAGATATTGATATCCGGATTTGTCtttgaagaagatgattttGTAAGGCCGTGGGAAGGACAAAACGACAATTTGGACCGGTATGCACTGCGGTGGGAGTCCAAGAATCTACTTGCCGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAATTGCGACGGAGCTGATGAGACAAGGGGCAATGTTGACTGTTTTAAGTGGACTTTTAACTGCATTGGCTTGGCCAACTGCATTGCTTTCAGCTACTGATTGGATCGACAGCATTTGGTCAATTGCTATTGACAGATCAGACAAGGCAGGGAAGCTGCTTGCTGAAGTATTATTGGGAGGATTGCAGGGAAATAGGCCTGTGACACTTATAGGTTACTCACTTGGAGCAAGAGTTATTTTCAAGTGTCTAGAGTGTTTGGCTGAAACAGAAAACCGCGCTGAACTTGTAGAAAGAGTTGTCCTTCTTGGAGCACCCATTGCAATCAAGGATGAGAATTGGGAAGCTGCTAGAAAGGTGGTAGCAGGAAGATTTATAAATGCTTATTCAAGGACGGACTGGATGCTTGGAGTTGCTTTCCGTGCCAGCCTACTTACTCAAGGTTTAGCTGGAATCCAACCAATCAATGTTCCTGGGATCCAAAATGTTGATGTGACAGATCACATTGAAGGTCACTCTTCTTATTTGTGGGCTACACAACGTGTCTTGGATAAACTTGAACTGGAAACGTATTATCCTGTTTATAACAGCATTCTTCCTAAAGAGTAA 2022 0.4332 MVSTPPSSYLTPTQRYAAGALMGLALHQAQLHQTHPLGLSTDEFPSPSSSKTGAVSEDPDLWVHHTSGLLRPIFIFLDIDSGAWSGLEETSGSSLATRHVGPFLRLLSEEYDDDNAKRLDQELALSEAVDALVLSLEKNSESSRSKREKSLEYEHQCREKISTADVQPNSEKVEMHLESKQEEDNLFFECKGDPHQGSSNSKTNEGPDETNEGPDEELMKLSYQRKVTVLYELLAACLSDLGEKDTKYTRRRKGYDARHRVALRLLATWLDIKWSKMEAVEMIVSCSAMAIVKEQESNKEETQSKESGWEKWKRNGIIGAAALTGGTLMAITGGLAAPAIAAGLGALAPTLGTLIPVIGAGGFAAAASAAGTVAGSVAVAASFGAAGAGLSGTKMARRVGSVDEFEFKTIGDNHNQGRLAVEILISGFVFEEDDFVRPWEGQNDNLDRYALRWESKNLLAVSTAIQDWLTSRIATELMRQGAMLTVLSGLLTALAWPTALLSATDWIDSIWSIAIDRSDKAGKLLAEVLLGGLQGNRPVTLIGYSLGARVIFKCLECLAETENRAELVERVVLLGAPIAIKDENWEAARKVVAGRFINAYSRTDWMLGVAFRASLLTQGLAGIQPINVPGIQNVDVTDHIEGHSSYLWATQRVLDKLELETYYPVYNSILPKE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00804 673 MobiDBLite consensus disorder prediction 37 55 - -
Tsu05g00804 673 MobiDBLite consensus disorder prediction 189 215 - -
Tsu05g00804 673 Gene3D alpha/beta hydrolase 463 659 IPR029058 -
Tsu05g00804 673 MobiDBLite consensus disorder prediction 140 155 - -
Tsu05g00804 673 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 7 668 - -
Tsu05g00804 673 MobiDBLite consensus disorder prediction 136 155 - -
Tsu05g00804 673 MobiDBLite consensus disorder prediction 37 58 - -
Tsu05g00804 673 Pfam Protein of unknown function (DUF726) 311 659 IPR007941 -
Tsu05g00804 673 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 7 668 IPR007941 -
Tsu05g00804 673 SUPERFAMILY alpha/beta-Hydrolases 529 587 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00804 Tsu-Chr5 6835471 6843099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00804 - - gmx:100782894 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00804 05 6835471 6843099 Tsu05g00804 05 6835471 6843099 ECH
Tsu05g00804 05 6835471 6843099 Tsu04g03483 04 44010590 44017688 PCT