Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03483 ATGGATACGGCATCGCCGTCGTCGTCAACCACCACCACGCCGTCGTTTCTATCACCAACACAGAGGTATGCTGCCGCAGCATTGTTCGGACTATCCCTTCACGAATCACAAATTAATCAAACCCGAATTCTCCCCTTTCCTGCTTCGGTTGACTCCATCTCCAACACCAATCGAATCAGTAGTAGTAGCACTAGTAGTAGTGATTCTGTCTCGGATGACCCCGATCTTTGGGTTCACCAACATTCCGGTTTGCTCCGCCCCGTTTTCAAGTTTCTAGCTATTGATTCATCTGCATGGTATGGATTAGAGGAAACTTCTGGTTCTTCTACTGCTACACATCATGTTGGACCCTTTATGAGACTGCTTTCACAAGAATCTGATGATGCTTCTGCTGAATCTGCTCAAAGGCTAGACAAAGAACTTGCATTGTCAAAAGCTGTTGATGCTATAGTACTTGGCATGGAAAAGAATTTGCAGCCTTCTATGTCAAAAAGAGAGAGGCTTCATGAATACGAGCAACGGTGTCGCGAAAAATTTTCAGTTCCTGATGTTCAATCTAATTCTGAAAAGGTTGATGTTGATGTAAACTTGGAAAACCATAATGAGACTGATGTTGCTCCTTTAATCAACTTTGAAGAAACGCACGAGGGACCTGATAATAGTAAAATTGATGAGAGACCAATTGATAGTAAAATTGATGAGAGACCAATTGAAGAAGTGACGATGCTTAGTGATCAGAGGAAAGTGACAGTTCTGTACGAGCTTCTATCTGCGTGTCTTTCGGATTTGCGTGACGATGACAAAGAATGTAAGCGGAAGAGAAAGGGTTACGATGCTCGTCATCGTGTGGCTCTGAGGTTGCTGGCAACATGGCTTGATGTCAAGTGGACAAAAATGGAGGCCATTGAGACCATGGTTACTTGTTCTGCAATGGCTATAATTAAAGAGCAAGAattaaagaaagaagaagatcaaGCAAAAGGAAGCAAGTGGGCGAAATTGAAGCGTGGTGGTATTATTGGCGCTGCTGCAATTACTGGGGGAACCTTGTTGGCTCTTACTGGTGGGTTAGCTGCACCAGCAATTGCCGCAGGACTTGGAGCTCTAGCTCCAACTTTGGGTACTCTGATCCCTGTAATTGGAGCCAGTGGATTTGCTGCAGCTGCCGGTGCTGCAGGAACTGTTGCTGGTTCTGTTGCTGTTGCTGCATCATTTGGCGCTGCTGGTGCTGGACTTACGGGAAGCAAAATGGCTAGGAGAGTAGGCGGTGTTGATGAATTTGAGTTCAAAGCTATCGGAGAAAATCATAACCAAGGCAGGCTAGGGGTTGAGATCTTGATCTCCGGATTTGTCTTTGAGAAGGAAGATTTTATAAGGCCATGGGAAGGACTGAATGACAACTTGGAAAGGTATTCACTTCAATGGGAGTCTAAAAATCTGATTGCTGTGAGCACTGCGATTCAGGATTGGCTTACTTCAAGACTTGCAATGCAGCTGATGAAGCAAGGGGCAATGATGACTGTTTTGAGCACACTTGTAACTGCTTTGGCTTGGCCAGCTGCATTACTTGCAGCAACTGATTTCATTGACAGTAAATGGACAATAGCTATTAACAGATCAAACAAAGCAGGAAAGTTGCTTGCCGAAGCATTATTGAAAGGATTGCAGGGAAATAGGCCTGTGACACTTGTAGGTTACTCTCTTGGGGCAAGAGTTATTTTCAAGTGCCTACAGTGTTTGGCTAAAACAGAAAATGGAGCCGAACTAGTAGAAAGAGTTGTACTTCTTGGAGCACCCATCTCAATCAGGGATGAGAACTGGGAAGCTGCTAGAAAGATGGTAGCAGGAAGGTTTGTAAATGCTTATTCAAGGAGTGACTGGATGCTTGGAGTTGCCTTTCGAGCCAGTTTACTCACAAAAGGATTAGCTGGAATTGAACCAGTTGATATTCCTGGGATCCAAAATGTCGATGTCACAGATCACATCGAAGGCCATTCATCTTATCTGTGGGCTACACAACAGATCTTAGACCAACTTCAGTTAGATACTTGTTTTCCGGTTTATAATGGCGTTTCTTGCATACAGTCAGGAGCAGAGCCGGAAATTTGGATGAAGGGAGGAGGGCAAGACCAAAAagtatag 2142 0.4398 MDTASPSSSTTTTPSFLSPTQRYAAAALFGLSLHESQINQTRILPFPASVDSISNTNRISSSSTSSSDSVSDDPDLWVHQHSGLLRPVFKFLAIDSSAWYGLEETSGSSTATHHVGPFMRLLSQESDDASAESAQRLDKELALSKAVDAIVLGMEKNLQPSMSKRERLHEYEQRCREKFSVPDVQSNSEKVDVDVNLENHNETDVAPLINFEETHEGPDNSKIDERPIDSKIDERPIEEVTMLSDQRKVTVLYELLSACLSDLRDDDKECKRKRKGYDARHRVALRLLATWLDVKWTKMEAIETMVTCSAMAIIKEQELKKEEDQAKGSKWAKLKRGGIIGAAAITGGTLLALTGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAAGAAGTVAGSVAVAASFGAAGAGLTGSKMARRVGGVDEFEFKAIGENHNQGRLGVEILISGFVFEKEDFIRPWEGLNDNLERYSLQWESKNLIAVSTAIQDWLTSRLAMQLMKQGAMMTVLSTLVTALAWPAALLAATDFIDSKWTIAINRSNKAGKLLAEALLKGLQGNRPVTLVGYSLGARVIFKCLQCLAKTENGAELVERVVLLGAPISIRDENWEAARKMVAGRFVNAYSRSDWMLGVAFRASLLTKGLAGIEPVDIPGIQNVDVTDHIEGHSSYLWATQQILDQLQLDTCFPVYNGVSCIQSGAEPEIWMKGGGQDQKV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03483 713 Gene3D alpha/beta hydrolase 485 681 IPR029058 -
Tsu04g03483 713 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 14 689 IPR007941 -
Tsu04g03483 713 SUPERFAMILY alpha/beta-Hydrolases 549 631 IPR029058 -
Tsu04g03483 713 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 14 689 - -
Tsu04g03483 713 Pfam Protein of unknown function (DUF726) 333 681 IPR007941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03483 Tsu-Chr4 44010590 44017688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03483 - - cam:101513647 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03483 04 44010590 44017688 Tsu04g03483 04 44010590 44017688 ECH
Tsu05g00804 05 6835471 6843099 Tsu04g03483 04 44010590 44017688 PCT