Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00747 atGGTGAACACGGTGACACTTCTTTGCTCAATGGGTAAATGGACACTGAAGATGGCTGGTGTGAAGTCTTACACAGTGGAGATAGAGCCGGGTACAGTAATGAGATTTTGGGTTCCATCTAAAACCATTTCAAAGACCAAGCCCATTTCAAAACCCACCAAGCCCGTGGTGGTTCTCCTCCACGGCTTCTGCGGCGATGGACTTGCAACTTGGTGGTCACAAATCATGGCATTAGCCAAAAACTATGCCGTTTATGTGCCAGACTTAATTTTCTTCGGCGGCTCCACAGCCGATAAGCCAAACCGGTCACCGACTTTTCAAGCCGAGTGTTTGGTGGCTGGGTTGAAGAAACTCGGGGTGGAGAAATGTATTGTGGTTGGATTCAGTTATGGTGGAATGGTGGCGTTTAAAATGGCTGAACTGTATAGTGAGCTGGTTCAAGCCGTGTTTGTAACTAGCTCGATTTTGGAAAATGTTGGGTCTTCTTGGTCAGAAATATTATTACCATCTTCTGTGGAGGGATTGAGAAAACTTCTCTCTGTTggtatatataaaaacattcGATTTCCCAACCGTATGTTAAGTGACTTTCTTaagGTGATGTTCTCGAATAGGAAGGAACGAAGTGAGCTATTAGAGGCCTTAGAGCTTAGCTACAAAGACATCAACATCCCAAAATTTTCACAGCGGATACATATTTTATGGGGTGAGGAAGATCAAGTTTTAAAACTAGAAGTTGCACACAACATGAAAGAGAATCTCGGAGATAACGCAACGATTGAAGTAATAAAAAAGGCTGGCCATTTGGCTCATTTGGAACGACCATGTATTTTCCTTAGGTGTTTAAAGAAGTTTCTTTCTTCCGTTATGCTTGGtgaaataaaataa 888 0.4167 MVNTVTLLCSMGKWTLKMAGVKSYTVEIEPGTVMRFWVPSKTISKTKPISKPTKPVVVLLHGFCGDGLATWWSQIMALAKNYAVYVPDLIFFGGSTADKPNRSPTFQAECLVAGLKKLGVEKCIVVGFSYGGMVAFKMAELYSELVQAVFVTSSILENVGSSWSEILLPSSVEGLRKLLSVGIYKNIRFPNRMLSDFLKVMFSNRKERSELLEALELSYKDINIPKFSQRIHILWGEEDQVLKLEVAHNMKENLGDNATIEVIKKAGHLAHLERPCIFLRCLKKFLSSVMLGEIK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00747 295 Gene3D alpha/beta hydrolase 11 290 IPR029058 -
Tsu05g00747 295 PRINTS Alpha/beta hydrolase fold signature 231 245 IPR000073 -
Tsu05g00747 295 PRINTS Alpha/beta hydrolase fold signature 125 138 IPR000073 -
Tsu05g00747 295 PRINTS Alpha/beta hydrolase fold signature 81 96 IPR000073 -
Tsu05g00747 295 PANTHER SI:DKEY-122A22.2 2 286 - -
Tsu05g00747 295 Pfam alpha/beta hydrolase fold 55 158 IPR000073 -
Tsu05g00747 295 PANTHER EPOXIDE HYDROLASE 4-LIKE 2 286 - -
Tsu05g00747 295 SUPERFAMILY alpha/beta-Hydrolases 18 286 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00747 Tsu-Chr5 6309668 6311940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00747 57 293 Miscellaneous Gene Families AT1G80280 24.643 3.07e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00747 - - mtr:MTR_5g020250 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00747 05 6309668 6311940 Tsu04g03410 04 43311945 43323616 ECH
Tsu05g00747 05 6309668 6311940 Tsu05g00747 05 6309668 6311940 ECH
Tsu05g00747 05 6309668 6311940 Tsu04g03410 04 43311945 43323616 PCT