Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00724 ATGGAAGATATTTGTGCAAATGAAAATAGTCTCAACAAGCATGCTTGTGCTTGTGTTTTGGCTGCCACTATTATCTCTGCAATATTTGGTTATAttaCAGGAGTTATGGCTGGAGCACTTTTATTCATAAAAGAAGAACTCATGATCACTGACATGCAAGTACAACTTCTAGCAGGAATCTTAAATGTTTGTGCATTACCAGCATGCATGATTGCAGGAAGATTATCCGATTACATTGGTCGACGCTACACAATCATGTTATCTTCGATATTTTTCTTCTTAGGCTCAACATTAATGGGATACGGTTCATCTTTTCCTATCTTAATTATTGGAAGAAGCATTGCCGGATTCGGTGTTGGTTTTGCACTTATAATAGCACCGGTTTATAGTGCCGAAATTTCATCACCTTCTTATCGAGGTTTTCTAACTTCTCTTCCCGATCTTTCCATTAACATCGGTTTCTTACTTGGGTACGTCTCAAATTTTTTCCTCGGAAAATTATCTTTAAGACTTGGATGGAGAATAATGTTAGCTATTCCTTCAATTCCATCAATTGGGTTAGTAATTCTAATGCTAAAATTAGTAGAATCACCTAGATGGTTAGTAATGCAAGGAAGGTTAAGTGATGCTAGAAAAGTGCTTTTATTAATCTCAAATTCAAAAGAAGAAGCTGAAAAAAgattgaaagaaataaaaattgctGTTGGAATTGATGAAAATTGTATCCAAAACATTGTTCATGTGCCACATAAAACTAAAAGTGGTGGGGGTGCATTAAAAGAAATGTTCTATAAACCTTCACCACATGTTAGTAGGATACTATTTGCAGCTATTGGTGttcatatttttcaacaaatttgtggagttgaagGTATTGTAGTATATAGTCCAAGAGTTTTTGAAAGAACAGGAATCACTGAAAAAAGTACATTACTTTTAGCCACGGTTGGTATTGGAATAAGTCAAACATTATTCACATTGTTGTCAAGTTTTTTGTTAGATAAAATTGGGAGAAGGACTTTATTGTTGGTAAGTTCAGGAGGTGTAGTTGTGTCTATGTTAGGATTAAGTATTTTTTCAGCTATAGTTGAAAATTCTAAGTTAGGTGAAGAACCATTATGGgctataatttttataattgtagttgtttatattttgatggcTTTTAATGCTATTGGAATTGGGCCAGTGACATGGGTTTATAGTTCTGAAATATTTCCACTTAGGTTAAGGGCACAAGGTCTTGGTGTTTGTGTGGTTGTGAATAGAATTACTAATGTGGCTGTGGTTACTAGTTTCATTTCAATTTATAAGACTATAACATTGGGAGGTACTTTCTTTATGCTTGTGGGGATTAATGCTTTTGGATGGTggttttattattctttcttGCCTGAAACTAAAGGAAGATCATTAGAAGATATGGAGACTATCTTTGGGAAAGATACTAAG 1452 0.3216 MEDICANENSLNKHACACVLAATIISAIFGYITGVMAGALLFIKEELMITDMQVQLLAGILNVCALPACMIAGRLSDYIGRRYTIMLSSIFFFLGSTLMGYGSSFPILIIGRSIAGFGVGFALIIAPVYSAEISSPSYRGFLTSLPDLSINIGFLLGYVSNFFLGKLSLRLGWRIMLAIPSIPSIGLVILMLKLVESPRWLVMQGRLSDARKVLLLISNSKEEAEKRLKEIKIAVGIDENCIQNIVHVPHKTKSGGGALKEMFYKPSPHVSRILFAAIGVHIFQQICGVEGIVVYSPRVFERTGITEKSTLLLATVGIGISQTLFTLLSSFLLDKIGRRTLLLVSSGGVVVSMLGLSIFSAIVENSKLGEEPLWAIIFIIVVVYILMAFNAIGIGPVTWVYSSEIFPLRLRAQGLGVCVVVNRITNVAVVTSFISIYKTITLGGTFFMLVGINAFGWWFYYSFLPETKGRSLEDMETIFGKDTK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00724 484 ProSitePatterns Sugar transport proteins signature 1. 329 346 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu05g00724 484 ProSitePatterns Sugar transport proteins signature 2. 114 139 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu05g00724 484 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 9 483 - -
Tsu05g00724 484 Pfam Sugar (and other) transporter 19 479 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu05g00724 484 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 9 483 IPR045262 GO:0015144
Tsu05g00724 484 SUPERFAMILY MFS general substrate transporter 19 476 IPR036259 -
Tsu05g00724 484 TIGRFAM SP: MFS transporter, sugar porter (SP) family 12 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu05g00724 484 Gene3D MFS general substrate transporter like domains 7 483 IPR036259 -
Tsu05g00724 484 PRINTS Sugar transporter signature 403 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu05g00724 484 PRINTS Sugar transporter signature 26 36 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu05g00724 484 PRINTS Sugar transporter signature 380 401 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu05g00724 484 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu05g00724 484 PRINTS Sugar transporter signature 109 128 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu05g00724 484 ProSiteProfiles Major facilitator superfamily (MFS) profile. 18 468 IPR020846 GO:0022857
Tsu05g00724 484 ProSitePatterns Sugar transport proteins signature 1. 72 89 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00724 Tsu-Chr5 6122779 6126033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00724 1 482 Organic Solute Cotransporters AT4G36670 50.207 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00724 - - gmx:100786322 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00724 05 6122779 6126033 Tsu04g03376 04 42937808 42940135 ECH
Tsu05g00724 05 6122779 6126033 Tsu05g00724 05 6122779 6126033 ECH