Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00706 ATGAGTTCCATGAGTGTTGGTACATGGGTTGGTCCCAATTCTAAGTGGAACCAAACAATCACAACTCAAAACCAAACTCTTGCTCCCTTTCTAGCTATTCCCATTTCATCACTTACCAatcaacaaagaagaaaaaaattggtttcttctttttcctctttCAAACTCTATGCAGTTCTCACTAATGTAGACAAAAACACCAAAGAAACCATacccaatttcaatttcaatgcaTACATGCTTGAAAAAGCTAATATAGTGAACAAAGCATTGGATGAAGCAATTGCACTAAAAGAGCCGGAGAAGATTCATGAAGCTATGCGATATTCCCTCCTGGCAGGAGGAAAAAGAGTTCGTCCAATACTTTGTATTGCCGCCTGCGAACTCGTAGGCGGCAAAGAAGAAACAGCAATTCCATCGGCCTGTGCCGTGGAAATGATTCATACTATGTCGTTGATCCATGACGATTTACCGTGCATGGACAACGATGATCTCCGACGAGGAAAGCCAACAAACCACAAAGTCTATGGCGAGGATGTAGCTGTCCTTGCTGGGGATGCGTTACTTTCATTCGCATTCGAACACGTGGCTGTTTCAACCACAGGGGTCCCACCTGAAAAAGTTGTCAAAGCAATTGCTGAGCTGGCAAAATCAGTTGGAAAAGAAGGACTTGCTGCAGGACAAATTGTGGATTTAGAATCAGAAGGGCTATCAAACGTCGATTTAAAGACACTCGAGTTTATACATCTTCGAAAAACCGCAGCTTTGTTGGAAGCTTCGGTTGTTATGGGAGCAATTATTGGTGGTGGTAGTGaagatgaaattgaaaaattaaggaAATTTGCTAGGTGTATTGGATTATTGTTTCAAGTTGTTGATGATATTCTTGATGTTACCAAATCTTCTGAGGAATTAGGGAAAACAGCAGGGAAAGATTTGATTGCTGATAAGGTTACTTATCCTAAACTTTTGGGATTGGAAAAATCTAAGGAGTTTGCTGAAAATTTGATTAAGGATGCACATGATTGTCTTATtggttttgattatgaaaagGTCGCTCCTTTACTTGCTTTAACCAATTACATTGCTTATAGGCAAAATTAA 1104 0.3705 MSSMSVGTWVGPNSKWNQTITTQNQTLAPFLAIPISSLTNQQRRKKLVSSFSSFKLYAVLTNVDKNTKETIPNFNFNAYMLEKANIVNKALDEAIALKEPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGKEETAIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHVAVSTTGVPPEKVVKAIAELAKSVGKEGLAAGQIVDLESEGLSNVDLKTLEFIHLRKTAALLEASVVMGAIIGGGSEDEIEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKVTYPKLLGLEKSKEFAENLIKDAHDCLIGFDYEKVAPLLALTNYIAYRQN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00706 367 Pfam Polyprenyl synthetase 101 337 IPR000092 GO:0008299
Tsu05g00706 367 ProSitePatterns Polyprenyl synthases signature 2. 285 297 IPR033749 -
Tsu05g00706 367 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 15 367 - -
Tsu05g00706 367 SFLD Polyprenyl Transferase Like 78 365 - -
Tsu05g00706 367 SUPERFAMILY Terpenoid synthases 77 343 IPR008949 -
Tsu05g00706 367 ProSitePatterns Polyprenyl synthases signature 1. 152 168 IPR033749 -
Tsu05g00706 367 CDD Trans_IPPS_HT 99 365 IPR000092 GO:0008299
Tsu05g00706 367 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 15 367 - -
Tsu05g00706 367 Gene3D Farnesyl Diphosphate Synthase 73 367 IPR008949 -
Tsu05g00706 367 SFLD Isoprenoid Synthase Type I 78 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00706 Tsu-Chr5 5954655 5955758 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00706 K13789 - gmx:100778289 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00706 05 5954655 5955758 Tsu05g00706 05 5954655 5955758 ECH
Tsu05g00706 05 5954655 5955758 Tsu04g03362 04 42814106 42815866 ECH
Tsu05g00706 05 5954655 5955758 Tsu04g03362 04 42814106 42815866 PCT