Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03362 ATGAGTACCATGAATCTTAACTCATGTTTCATGTTCAATCAACTTACTAGTGCTACAACAACCAGATCCAGATCCAGAATCTCATCTTTCTATTTTACCAAAATACCCATTTCAATCTCAACCATTAAACCAAAAACCCATAATCACCAATTCAACAATTTTTCAGTCTCATCTTTACTCACAAAACAAGAAACAATAGAAACCGAAGAAAAACCGGTTTTCAATTTCAACACTTACATGATTGAAAAAGCAACTAGGGTTAACAAAGCCCTAGACGACGCCGTTTCATTACGCGAACCGTTAAAAGTTCACGAAGCTATGCGATACTCTCTCCTCGCCGGCGGAAAACGTGTCCGGCCAGTTCTCTGTTTAGCCGCCTGCGAACTCGTCGGCGGAGCAGAATCCATGGCGATGCCAGCCGCTTGTGCTGTTGAAATGATTCACACCATGTCGTTAATCCACGACGATCTTCCTTGTATGGATAACGACGATCTCCGACGAGGTAAACCGACGAATCACAAAGTATTCGGTGAAGACGTCGCAGTTCTCGCCGGAGATGCGTTACTCGCTTTCGCTTTCGAGCATATTGCGGTATCTACAGCCGGAGTTTCTCCGGCGAGAATTGTCCGTGCAATCGGTGAATTAGCGAAATCGATCGGCTCCGAAGGACTGGTAGCCGGTCAAGTTGTTGATATTAACTCAGAAGGTTTATCAGATGTTGGATTAGAGAGACTTGAATTTATTCATCTTCATAAAACTGCTGCTTTGTTAGAAGGTGCTGTTGTTCTTGGTGCAATTCTTGGTGGTGGTTGTGATGAAGATGttgaaaaattgagaaaatttgCTAGATATATAGGTTTATTGTTTCAGGTTGTTGATGATATTCTTGATGTTACAAAATCTTCACAGGAGTTAGGTAAAACTGCTGGGAAAGATTTGGTAGCTGATAAAGTTACTTATCCAAAGCTTTTAGGGATTGAAAAATCTAAAGAATTTGCTCAGAAATTGAACAGTGATGCACAAGATCAACTTTCTGGGTTTGATTCTAATAAATCTGCTCCTTTGATTGCTTTGGCTAATTACATTGCTTATAGGCAAAACTAA 1104 0.4031 MSTMNLNSCFMFNQLTSATTTRSRSRISSFYFTKIPISISTIKPKTHNHQFNNFSVSSLLTKQETIETEEKPVFNFNTYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGAESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGCDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAQKLNSDAQDQLSGFDSNKSAPLIALANYIAYRQN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03362 367 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 11 367 - -
Tsu04g03362 367 ProSitePatterns Polyprenyl synthases signature 2. 285 297 IPR033749 -
Tsu04g03362 367 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 11 367 - -
Tsu04g03362 367 CDD Trans_IPPS_HT 103 365 IPR000092 GO:0008299
Tsu04g03362 367 ProSitePatterns Polyprenyl synthases signature 1. 152 168 IPR033749 -
Tsu04g03362 367 Pfam Polyprenyl synthetase 103 337 IPR000092 GO:0008299
Tsu04g03362 367 SFLD Isoprenoid Synthase Type I 78 365 - -
Tsu04g03362 367 Gene3D Farnesyl Diphosphate Synthase 73 367 IPR008949 -
Tsu04g03362 367 SFLD Polyprenyl Transferase Like 78 365 - -
Tsu04g03362 367 SUPERFAMILY Terpenoid synthases 77 350 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03362 Tsu-Chr4 42814106 42815866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03362 K13789 - zju:107424859 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03362 04 42814106 42815866 Tsu04g03362 04 42814106 42815866 ECH
Tsu05g00706 05 5954655 5955758 Tsu04g03362 04 42814106 42815866 ECH
Tsu05g00706 05 5954655 5955758 Tsu04g03362 04 42814106 42815866 PCT