Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00704 atggCGTTCAAGAAAACCCTTGCTCAACGGTTATTCAATATAACCAAAATATCGTCACAAAATCTCACGAATTGTCGCATTTCATCTTCCTCCGTTCGCGGTGGTGTTTCATCGACGTCGACGGAGTCCGACATTTCACCGGAACCAGGAGATAACACTGGAATATTCCGGAGATTTCTTCACAAACGAACCGGTTTTGAACCAAAACAAACCGGATTCAAACCGGAGCTTCATAATGGAAATCTGGTGGAGAAGCTGAGGGAAATGGATATTGGTCGGAGTAGGATTAATTTAGAAGGACTGAAACCACCGGTGACGGAGAAGACGGCGGAGGACGGTGTTAGTGTCGGTGATGTGAAGAAACTGTTGAAGGTTGCGCAGTTGGAATTGGTGAAATCGAAGCTGAGAGATACCGGAAAAAGTTGCGTAACGGTTTCGGAGTTTATTCGGATCTGCTCCGAATATTGTTCGGATCATGATCAAGCGGTTAAGATTGCAAAGATGCTTGATGATTCTGCGGCTGTGATTATCTTAGGAGATATCGTTTTTCTCAGACCTGAACAGGTAGCAAAAACAATTCAAAGTCTGTTTACTACACCAGGAGCAAAGGTGCCAgattcaataaaaaaagaatatgaagaAATGCAGAAAAAGAAGCTAGCTATTGACAAAAAAGCCGACAACTTGGTTCGCCGCGAGCTTTGGGGAGGTCTGGGTTTCATGATAGTGCAAACTGTGGGATTCATGAGACTCACCTTTTGGGAGCTTAATTGGGATGTTATGGAACCCATTTGCTTCTATTTAACATCCATGTACTTCATGGCTGGTTACACATTCTTCCTCCGCACCGCTAAAGAACCTTCGTTTGAAGGTTTTTATGAAGCCCGTTTCAACTTGAAGCAGAAGCGTCTCATGAAGCTTCACAATTTTGACCTTGAAAAGTACAATAAGCTTAAGGATGTTTGTTCTCCCAACATTCCTCCAATGTTTGATTCATCCATTGCTCTCACATTTGGAAATTCCTCAcaatataattga 1038 0.4171 MAFKKTLAQRLFNITKISSQNLTNCRISSSSVRGGVSSTSTESDISPEPGDNTGIFRRFLHKRTGFEPKQTGFKPELHNGNLVEKLREMDIGRSRINLEGLKPPVTEKTAEDGVSVGDVKKLLKVAQLELVKSKLRDTGKSCVTVSEFIRICSEYCSDHDQAVKIAKMLDDSAAVIILGDIVFLRPEQVAKTIQSLFTTPGAKVPDSIKKEYEEMQKKKLAIDKKADNLVRRELWGGLGFMIVQTVGFMRLTFWELNWDVMEPICFYLTSMYFMAGYTFFLRTAKEPSFEGFYEARFNLKQKRLMKLHNFDLEKYNKLKDVCSPNIPPMFDSSIALTFGNSSQYN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00704 345 Pfam Mitochondrial calcium uniporter 160 318 IPR006769 -
Tsu05g00704 345 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 331 - -
Tsu05g00704 345 MobiDBLite consensus disorder prediction 28 52 - -
Tsu05g00704 345 Coils Coil 212 232 - -
Tsu05g00704 345 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 331 IPR039055 GO:0051560
Tsu05g00704 345 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00704 Tsu-Chr5 5939377 5941833 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00704 K20858 - gmx:100815180 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00704 05 5939377 5941833 Tsu05g00704 05 5939377 5941833 ECH
Tsu05g00704 05 5939377 5941833 Tsu04g03360 04 42778373 42782683 ECH