Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g03360 aTGGCGTTTAAGAAAACCCTAACTCAACGCCTCTTAAGCATAACAAAAATCTCATCACAATCTCTTTCTAACTGTcgcatttcatcttcttctattCAATCACGAACTCCTTCCACCGCCGCTCACCGTGACATTGCTCCGGAGCCGGGAGATTCAACAACCGGTGGCGTTTTCCGTAGATTCCTCCACAAAAGAGCCGTATTCCAACCGGAGATCGGACAGAGGATTCCTTCCTCCGCCGATGGACTTCTCCAGAAGCTTCGGGAGATGGACATTGCGAAAAGCCGGATCCGATTAGACGGTTTGAGTCCGCCAGAAACGGAGGAATCAACGGTTGAAGTTGAAGATGTTCGGAAATTATTGAGAGCGGCTCAACTTGAATCTGTGAAATCGAAACTGAGGAAGTTTCCGCAGAGTTGTGTTAATTATTCGGAGTTTATTCAAATGTGTGGTGAAAATTGTTCCGATCAAGAACAAGCGAAGAAGATTGCGAAGATACTCGATGATTCAGCGACTGTGATTGTCTTAGGCGACGTCGTTTTTCTCAAACCTGAACAGGTAGCAAAAACAATCCAGGCTCTACTCCCTGTACCAGGACCAAAGCCAAACGAGGCAGAAAGAAAAGAACTTGAGGAAATGGAGAAAGAGAAAGTAGCCATTGACAACAGAGCTGACAAAATGGTTCGCCGTGAGCTCTGGGGAGGACTCGGTTTTCTGATGGTGCAAACATTAGCATTCATGAGGCTTACATTCTGGGAACTTAACTGGGATGTAATGGAGCCTATATGCTTTTATGTGACCTCTATGTACTTCATGGCCGGCTACACATTCTTTCTCAGAACATCGAAAGAACCTTGCTTTGAAGGTTTCTACCAAAGCCGTTTCAGCACTAAGCAAAAGCGTTTGATGAAACTTCACAATTTTGATATTGCAAGGTATAATCAACTTAGGGATGCGTCACCACTAGCATCCTCTTCTGAGTTGAATTCAAATATTGTTCATCCATTGAACCAATTTCATAGAAATATTTGA 1032 0.4312 MAFKKTLTQRLLSITKISSQSLSNCRISSSSIQSRTPSTAAHRDIAPEPGDSTTGGVFRRFLHKRAVFQPEIGQRIPSSADGLLQKLREMDIAKSRIRLDGLSPPETEESTVEVEDVRKLLRAAQLESVKSKLRKFPQSCVNYSEFIQMCGENCSDQEQAKKIAKILDDSATVIVLGDVVFLKPEQVAKTIQALLPVPGPKPNEAERKELEEMEKEKVAIDNRADKMVRRELWGGLGFLMVQTLAFMRLTFWELNWDVMEPICFYVTSMYFMAGYTFFLRTSKEPCFEGFYQSRFSTKQKRLMKLHNFDIARYNQLRDASPLASSSELNSNIVHPLNQFHRNI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g03360 343 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 324 - -
Tsu04g03360 343 MobiDBLite consensus disorder prediction 26 40 - -
Tsu04g03360 343 MobiDBLite consensus disorder prediction 26 54 - -
Tsu04g03360 343 Pfam Mitochondrial calcium uniporter 158 316 IPR006769 -
Tsu04g03360 343 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 324 IPR039055 GO:0051560
Tsu04g03360 343 Coils Coil 203 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g03360 Tsu-Chr4 42778373 42782683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g03360 K20858 - gmx:100809065 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03360 04 42778373 42782683 Tsu04g03360 04 42778373 42782683 ECH
Tsu05g00704 05 5939377 5941833 Tsu04g03360 04 42778373 42782683 ECH