Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00470 ATGTCTTGCTTAGAGTTAGAACCCTCTAAAGTGAACAAGTTCATGGAagaatcagaatcagaagaATTGACTCTTGATGGAAGTGTTGATTTCAAAGGCCGTCCTGCAATCAGAGCTAAATCTGGAAGATGGGGAGCTGGAATCATCATACTCTTGAACCAATGTTTGGCAACTTTGGCATTCTTTGGGATTGGAGTGAACCTAGTAGTATTCCTGACAAGGGTGGTAGGACAAAATAACGCAGAAGCCGCTAACAATGTTAGCAAATGGACTGGAACTGTTTACATCTTCTCTCTTGTTGGAGCTTTTCTTAGTGACTCTTATTGGGGAAGATATAAAACATGTGCCGTCTTTCAGGTCATTTTTGTAATTGGTCTAATGTCCTTATCACTGTCATCATACCTCTTTTTGATTAAACCTAAAGGCTGTGGGAATCAAACAATTCAATGTGGAAAACATTCAAGTTGGGAGATGGGGATGTTCTACCTCTCAATCTATCTCATTGCCTTGGGGAATGGAGGGTATCAACCAAATATTGCCACATTCGGGGCTGATCAGTTTGACGAGGAGCACTCGAAAGAGGGTCACAATAAAGTAGCATTCTTTAGCTACTTCTACCTAGCTTTGAACTTTGGGCAGCTCTTTTCAAACACCATTCTGGTCTATTTCGAAGATGAAGGAATGTGGGCTCTTGGTTTCTGGCTGTCTGCAGGCTGTGCTTTTGCTGCATTGATATTGTTTCTTGTAGGCACCCCAAGGTACCGACATTTCAAGCCAAGTGGCAACCCTCTAGCCAGGTTCTGCCAAGTCCTCGTCGCTGCATCCAGGAAGGTGAAGGTTCAAATGCCATCAAATGGAGAGGATTTGTACAACATGGATACAAAGGAGTGTTCCAACACTATGAACAGAAAGATCCTCCACACACATGGGTTCAAGTTCTTGGATAGGGCAGCGTTTATATCTTCAAGAGATCTTGATAACCAGAAAGTCGAAAGTTACAACCCATGGCGTATTTGTCCTGTAAGTCAAGTTGAAGAAGTGAAGTGCATACTGAGACTCCTTCCAATTTGGCTCTGCACCATAATATACTCGGTGGTTTTCACACAAATGGCTTCTCTTTTTGTGGAGCAAGGTGCTGCAATGAAAACAActgtttctaatttcaaagtaCCGCCAGCTAGTATGTCTAGCTTTGATATCATCAGTGTTgctgttttcattttcttttaccGTCGAATTCTTGATCCATTTGTGGGAAAACTCAAAAAGTCAGATTCTAAGGGACTTACGGAGCTTCAGAGAATGGGAGTTGGACTTGTTATAGCTGTAATAGCAATGGTTTCAGCTGGAATAGTTGAATGCTATAGGCTTAAGCATGCAAACCAAGACTGCCGCCACTGCAAAGACTCGAGTACTTTGAGCATCTTCTGGCAAATCCCTCAGTATGCATTTATAGGAGCTTCCGAGGTGTTTATGTATGTTGGGCAGTTAGAGTTCTTCAACGCTCAGACACCAGATGGCTTAAAGAGTTTCGGAAGTGCGCTTTGCATGACATCAATTTCCCTTGGCAACTATGTAAGTAGCTTACTTGTCAGTATAGTTATGAAGATCTCTACCGAGGATCATATGCCGGGTTGGATCCCAGGAAACCTCAATAAAGGTCACCTAGATAGGTTTTACTTCCTCTTAGCAGCCTTGACATCGATGGACTTGATTGCCTATATTGCATGTGCAAAGTGGTACAAGAGTATACAGCTGGGCGAGAAACGCAAAGAGAATGATGAGCCAGGTAGCCTCATAGTCTAA 1806 0.4158 MSCLELEPSKVNKFMEESESEELTLDGSVDFKGRPAIRAKSGRWGAGIIILLNQCLATLAFFGIGVNLVVFLTRVVGQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLIKPKGCGNQTIQCGKHSSWEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGHNKVAFFSYFYLALNFGQLFSNTILVYFEDEGMWALGFWLSAGCAFAALILFLVGTPRYRHFKPSGNPLARFCQVLVAASRKVKVQMPSNGEDLYNMDTKECSNTMNRKILHTHGFKFLDRAAFISSRDLDNQKVESYNPWRICPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTVSNFKVPPASMSSFDIISVAVFIFFYRRILDPFVGKLKKSDSKGLTELQRMGVGLVIAVIAMVSAGIVECYRLKHANQDCRHCKDSSTLSIFWQIPQYAFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSIVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAALTSMDLIAYIACAKWYKSIQLGEKRKENDEPGSLIV 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00470 601 CDD MFS_NPF7 44 580 - -
Tsu05g00470 601 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 590 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu05g00470 601 PANTHER PEPTIDE TRANSPORTER 18 590 - -
Tsu05g00470 601 SUPERFAMILY MFS general substrate transporter 32 592 IPR036259 -
Tsu05g00470 601 Pfam POT family 112 540 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu05g00470 601 Gene3D MFS general substrate transporter like domains 15 588 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00470 Tsu-Chr5 3635428 3641312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00470 1 594 Organic Solute Cotransporters AT1G32450 74.539 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00470 K14638 - gmx:100776457 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00470 05 3635428 3641312 Tsu04g02261 04 25217163 25222675 PCT