Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02261 ATGGCTTGCTTAGAGGTTTGCAAAGAGGGGAAATTCAAAGAAGAAACAGAAGAGTTAACTCTTGATGGAAGTGTTGATTGGCATGGTCGCCCTGCAATCAGAGCCAAATCTGGGAGATGGTTCGCTGGAACCATTATACTATTGAACCAAGGTCTTGCAACCTTAGCATTCTTTGGAGTTGGAGTGAACCTAGTTCTCTTCTTGACAAGGGTCATGGGTCAAAATAATGCTGATGCTGCTAACAATGTCAGTAAATGGACTGGCACAGTTTACATCTTCTCTCTTGTTGGTGCTTTCCTTAGTGATTCCTATTGGGGAAGATACAAAACATGTGCCATCTTTCAAGGCATTTTTGTACTTGGTCTAGTGTCCTTGTCCTTTTCAACATACCTTGCTTTGTTAAGGCCAAAAGGTTGTGGAAATGGAAAACTTGAATGTGGGAAACATTCAAGCTTTGAAATGGGAATGTTCTACTTATCAATCTATCTAATTGCATTAGGAAATGGAGGGTATCAACCAAACATTGCAACATTTGGTGCTGACCAATTTGATGAAGATCATTCAAAGGAAAGTTACTCGAAAGTGGCGTTTTTTAGCTACTTTTATCTCGCTTTGAATCTTGGTTCGCTTTTTTCAAACACGATTTTGGGCTAttttgaagatgaaggattATGGGCTCTTGGGTTTTGGGCTTCTGCTGGTTCAGCCTTTTTGGCCCTTGTACTATTTCTTGTTGGCACACCACAATATAGACACTTTAAGCCTTGTGGTAATCCTCTTTCAAGATTCTGTCAAGTCCTTGTTGCTGCTTCAAGGAAATTAGGAGTTCAAATGACATCAAATGGAGAAGACTTGTATGTTAGTGATGAAAAGGAATCTTCTAACAATCCCAACAGAAAGATTCTTCACACACATGGTTTCAAGTTTTTGGACAGGGCAGCTTTTATAACTTCAAGAGATTTAGAGGTCCAAAAAGGAGGCCAAAATAACCCATGGTATCTTTGTCCTATAACTCAAGTTGAAGAAGTAAAATGCATACTAAGACTTCTCCCAATTTGGCTCTGCACAATAATATACTCAGTTGTTTTCACTCAAATGGCTTCACTTTTCGTCGAACAAGGCGCTGCAATGAAAACCACAATTTCCCGTTTCAGAATCCCACCAGCAAGCATGTCTAGTTTTGACATCCTAAGCGTAGCCGTCTTCATTTTCTTCTACCGTCGAGTACTCGATCCACTTGTCGGAAAGCTAAAAAAATCAAGCTCGAAGGGACTCACCGAACTACAAAGAATGGGAATCGGTCTTGTAATAGCAGTAATAGCAATGGTTTCAGCTGGAATAGTCGAATGCTATAGACTCAAATATGCAAAACAAGGTGGAACAAGCTCTCTAAGTATCTTCTGGCAAATTCCTCAGTATGCACTTATAGGAGCTTCTGAGGTTTTCATGTATGTAGGACAATTAGAATTCTTCAATGCTCAAACACCGGACGGATTAAAGAGCTTTGGAAGCGCGCTTTGCATGACGAGTATTTCACTCGGTAACTATGTGAGTAGCTTGATTGTTAGTATTGTTATGAAGATTTCAACTGAAGATCATATGCCAGGATGGATCCCTGGAAACTTGAATAGAGGTCATTTAGATAGGTTTTTCTTCCTATTGGCTGCTTTGACTTCTATTGATTTGATTGCTTACATTGCTTGTGCAAAGTGGTTCCAAAATATTCAGATGGAATGCAAATATGAAAACAATGATGAGCCTAGTAGCTGCAAAGTTTAA 1779 0.3924 MACLEVCKEGKFKEETEELTLDGSVDWHGRPAIRAKSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVMGQNNADAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVLGLVSLSFSTYLALLRPKGCGNGKLECGKHSSFEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEDHSKESYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFLALVLFLVGTPQYRHFKPCGNPLSRFCQVLVAASRKLGVQMTSNGEDLYVSDEKESSNNPNRKILHTHGFKFLDRAAFITSRDLEVQKGGQNNPWYLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISRFRIPPASMSSFDILSVAVFIFFYRRVLDPLVGKLKKSSSKGLTELQRMGIGLVIAVIAMVSAGIVECYRLKYAKQGGTSSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFFFLLAALTSIDLIAYIACAKWFQNIQMECKYENNDEPSSCKV 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02261 592 CDD MFS_NPF7 40 571 - -
Tsu04g02261 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g02261 592 Pfam POT family 108 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g02261 592 Gene3D MFS general substrate transporter like domains 11 580 IPR036259 -
Tsu04g02261 592 SUPERFAMILY MFS general substrate transporter 31 577 IPR036259 -
Tsu04g02261 592 PANTHER PEPTIDE TRANSPORTER 15 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02261 Tsu-Chr4 25217163 25222675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02261 1 585 Organic Solute Cotransporters AT1G32450 74.916 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02261 K14638 - gmx:100808276 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00470 05 3635428 3641312 Tsu04g02261 04 25217163 25222675 PCT