Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00466 atgaagGGAAGAAGAGGTAGAAGATCAGAGgcTTTTTGGCCTTCCATTGTGATGAAAAAATGGCTTAATATTAAGCCTAAGGTGAATGATTTtagtgaagatgaagttgaCACTGAAACTGAGAGTGAAGATGATGTATGCTCTCCTAAACAATCAAGAATGCAAATTTCCGACGATAGTCCGTTTAGAACACAAGGGATTCAATCTCAATCTATATTCTCTAGTCAAATACCAGATTCATCTTTTATTAAGGgatacaaaacaaaacacagaAGAGGAAAATCGGAAACTCTACGTGCTCAGTATATAAATACTAAGGAAGTGAGGGTAGCAATTGGATCTTGGAATGTTGCTGGAAGACATCCATCTGAGGATCTTGATATTGATGATTGGATTTGTGCTGAAGAACCAAGTGACATTTACATTTTCGGTTTCCAGGAAGTGGTTCCATTGAATGCTGGAAATGTACTAGGAGCAGAAGATAATACACCGATCCAAAAATGGGAAGCAATCATTAGAAGATCTCTAAACAAATCTTCGGAGCCTGACAGTAAACACAAAAGCCATAGCGCGCCACCTTCTCCGGTTTTGCGAACTTCTTCAGCTGCTGATGTACTAGCTGATAATATAGATGCTGCTAATCCAATTGATATGATGAATGACGAGTTCATGGAAAATGTTGTTGACAAATACGATCTGCAAAAGCTTGAAGCAAATAACATAATTAGCATAGGGAATGATTTACATGTAAGGAAAGTTTATGGTATTGATCTTGATTGGCCTGAACGTCCGTTAGACGCAATCTCACAAATTGTTGATTCGAATCCGAAGTTAAGGAGAGTACTAAGTAGTAATGCTAGAATTGGCTTTGATTTGAATGATAATGCTTTCATATACGGCGGTGGTGGTGGAGGTGGATTGAAACGTATGCACCATAGTTACGAAGATTTGGCTTTGTTATTGAAAGAGCAAAAAGTTATACCTAAAGTAGTTGATTCTTTAGATGATGTATCTGAGATATTGTCTGATGAAGGTGATGATGCTTTTATTGAATTACCTGAGAACCAAGATGATAATGGAGTAGGCGAGACGAAATCGCACGCGAGGTATGTTCGGATTATCAGCAAGCAAATGGTGGGAATATATGTATCTGTTTGGGTGCAGAGAAGATTGAGAAGACAcataaataatttgaaagttTCTCCTGTTGGTGTTGGTCTTATGGGCTACATGGGAAACAAGGGTTCAGTTTCGATTAGTATGTCACTCTTTCAGTCACGTATGTGCTTTGTTTGTTCTCATCTGACTTCTGGTACGAAGGATGGAGCGGAACAAAGACGAAACTCTGATGTTAATGAAATTCTACGACGCACTTGCTTCTCATCCGTCTTTGATACAGATCAAGCACTAACAATACCAGCACACGATCAGATTTTCTGGTTTGGAGACTTGAATTATCGGATCAGTATGTTAGATTCGGAGGTTCGAAAATTGGTGGCTCTAAAAAAGTGGGATGAACTAATGAACTATGATCAGCTAAGCAATGAATTGCGTGTCGGACGTGTATTCGATGGATGGAAAGAAGGGTCGATAAACTTTGCGCCAACttacaaatatgaaattaacTCTGATAGATATGTTGGTGAAATTCCAAAAGAAGGGGAGAAAAAAAGAGCTCCTGCATGGTGTGACAGAATATTATGGCTAGGAAAAGGAATAAAGCAACTACAATATGAACGAGCAGAAATTAAGATCTCAGATCATAGACCAGTTAGTTCAattttcttggttgaagttgaAGTATTCGATCATCGCAAATTAAGACGCGCACTAAATTTCACCAATACTGCTGCAGTACATCCAGAGATTTTTCCTGATGAAGATGGTCAATTTTTCTAA 1899 0.3681 MKGRRGRRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDVCSPKQSRMQISDDSPFRTQGIQSQSIFSSQIPDSSFIKGYKTKHRRGKSETLRAQYINTKEVRVAIGSWNVAGRHPSEDLDIDDWICAEEPSDIYIFGFQEVVPLNAGNVLGAEDNTPIQKWEAIIRRSLNKSSEPDSKHKSHSAPPSPVLRTSSAADVLADNIDAANPIDMMNDEFMENVVDKYDLQKLEANNIISIGNDLHVRKVYGIDLDWPERPLDAISQIVDSNPKLRRVLSSNARIGFDLNDNAFIYGGGGGGGLKRMHHSYEDLALLLKEQKVIPKVVDSLDDVSEILSDEGDDAFIELPENQDDNGVGETKSHARYVRIISKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGTKDGAEQRRNSDVNEILRRTCFSSVFDTDQALTIPAHDQIFWFGDLNYRISMLDSEVRKLVALKKWDELMNYDQLSNELRVGRVFDGWKEGSINFAPTYKYEINSDRYVGEIPKEGEKKRAPAWCDRILWLGKGIKQLQYERAEIKISDHRPVSSIFLVEVEVFDHRKLRRALNFTNTAAVHPEIFPDEDGQFF 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00466 632 Gene3D Endonuclease/exonuclease/phosphatase 326 622 IPR036691 -
Tsu05g00466 632 SUPERFAMILY DNase I-like 99 613 IPR036691 -
Tsu05g00466 632 Gene3D Endonuclease/exonuclease/phosphatase 88 192 IPR036691 -
Tsu05g00466 632 SMART i5p_5 315 603 IPR000300 GO:0016791|GO:0046856
Tsu05g00466 632 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 626 IPR045849 GO:0004445|GO:0046855
Tsu05g00466 632 MobiDBLite consensus disorder prediction 32 62 - -
Tsu05g00466 632 MobiDBLite consensus disorder prediction 177 198 - -
Tsu05g00466 632 Pfam Endonuclease/Exonuclease/phosphatase family 114 588 IPR005135 GO:0003824
Tsu05g00466 632 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00466 Tsu-Chr5 3619891 3623702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00466 370 568 Acyl Lipid Metabolism Gene Families AT1G05630 34.956 3.25e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00466 K24221 - ccaj:109800886 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00466 05 3619891 3623702 Tsu04g02265 04 25246662 25249748 PCT