Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02265 ATGAAATCAAGGCAAGGAAAACGCTCAGAGGTGTTTTGGCCCTCCACGGTGATGAAGAAATGGTTGAATATAAAGCAAAAGGTGTATGATTTTAGTGAAGATGAAGCCGATACTGAAACTGAGAGtgaaagtgaagaagaagataatGATAGATCTTGTAAGGACTACAAAATGAAACGGCATAGAAGAGGAAAATCAGAAACTTTGCGAGCTCAATACATAAATACAAAGGAAGTGAGGGTAACAATTGGCACTTGGAATGTTGCTGGAATAGTTCCATGTAATGATCTTGAAATTGAGGATTGGCTTTGTACTGAAAAACCATCAGATATTTACATTATTGGTTTTCAAGAGGTGGTTCCATTGAATGCTGGAAATGTATTGGGAGCAGAAGATATTAAACCAATCTCAAAATGGGAATCAATCATTAGAAGAACTCTAAACAAATCTTCTGAACATGAAACTAAACAGAAAAGCTACAGTGCCCCTCATTCACCAGTTAGAACAAATTTTGCTTCTAGTATACTAATAAATCCAGATATGTTCGATGAGGACTATATAGGAACTTtagacagtgatgatgatgagataaaaaaggaagaagttcTATATGATATTGATCTTCAAACTATACTTGATTGGCCTGAACGTCCGTTAGATGCAATCCATTGTGTTGATACGACTCCAAAATTACGTAGAATACTAAGCAGCTCGGATATAATTGGCTTTAACTTGATAGATAATGCTTCCTTGTATGGATATGGAATGAAAGGCTCACACCAAAGTTCTGGAAATTTGAGTTTGTTATTGAAAGAACAACAACAGGAAATGGTGCCTCAAGTATTTCATTCCCTTTATGGTGTAACTAACATGTTATCTGATGAAGAAAATGATACTTTCTGTGAATTACAAAATAAGATAGATGTTAATGGAATAGTTAGTGTGAAATCACATCCTAAGTATGTTAGGATTGTGAGTAAGCAAATGGTAGGAATATATGTGTCTGTTTGGGTGCAAAGAAAGCTGAGAAGGCACATTAATCATTTGAAAGTTTCTCAAGTTGGAGTTGGTCTTATGGGCTATATGGGAAACAAGGGTTCTGTTACGGTTAGTATGTCGGTTTTTCAGTCACGCATGTGCTTTGTTTGTTCGCATCTGGCTTCTGGTCAGAAATATGGAGCAGAACAAAGACGAAACTCGGATGTTCATGAAATTCTACAACGCACTCGTTTCTCATCAGCCTTTGATATAGATCAACCACAGACAATCTCATTGCATGATCAGATTTTTTGGTTTGGCGATTTGAATTATCGTATCAATATGTCGGATGGTGAGGTTCGGAAGCTAGTAGATTTAAAGAAGTGGGAAAAACTCATGAATTATGATCAGCTAAGCAATGAGTTATGTAATGGGCATGTATTCGAGGGATGGAAAGAGGGGTTGATAAACTTCCCACCTACTTACAAGTATGAATTTAACTCTGATAAATATGCGGGCGAGAACACACAAGAATGGGAGAAAAAGAGATCTCCGGCTTGGTGCGATCGCATACTTTGGCTAGGAAAAGGAATAAAGCAACTTCAGTATCAATGTGCCGAAAATAAGCTCTCAGATCATCGACCGGTTAGTTCAATCTTTTTGGTTGATGTTGAAGTATTTGACCACAGGAAGCTACAAAGAGCTCTAAATTTCACAAGTGCAGTTGTACATCCAGAGGTTTTCTTTAAAGAGGATGAGGACTTATCATATTACTAG 1755 0.3595 MKSRQGKRSEVFWPSTVMKKWLNIKQKVYDFSEDEADTETESESEEEDNDRSCKDYKMKRHRRGKSETLRAQYINTKEVRVTIGTWNVAGIVPCNDLEIEDWLCTEKPSDIYIIGFQEVVPLNAGNVLGAEDIKPISKWESIIRRTLNKSSEHETKQKSYSAPHSPVRTNFASSILINPDMFDEDYIGTLDSDDDEIKKEEVLYDIDLQTILDWPERPLDAIHCVDTTPKLRRILSSSDIIGFNLIDNASLYGYGMKGSHQSSGNLSLLLKEQQQEMVPQVFHSLYGVTNMLSDEENDTFCELQNKIDVNGIVSVKSHPKYVRIVSKQMVGIYVSVWVQRKLRRHINHLKVSQVGVGLMGYMGNKGSVTVSMSVFQSRMCFVCSHLASGQKYGAEQRRNSDVHEILQRTRFSSAFDIDQPQTISLHDQIFWFGDLNYRINMSDGEVRKLVDLKKWEKLMNYDQLSNELCNGHVFEGWKEGLINFPPTYKYEFNSDKYAGENTQEWEKKRSPAWCDRILWLGKGIKQLQYQCAENKLSDHRPVSSIFLVDVEVFDHRKLQRALNFTSAVVHPEVFFKEDEDLSYY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02265 584 Gene3D Endonuclease/exonuclease/phosphatase 57 184 IPR036691 -
Tsu04g02265 584 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 577 - -
Tsu04g02265 584 SMART i5p_5 258 554 IPR000300 GO:0016791|GO:0046856
Tsu04g02265 584 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 577 IPR045849 GO:0004445|GO:0046855
Tsu04g02265 584 MobiDBLite consensus disorder prediction 33 59 - -
Tsu04g02265 584 Gene3D Endonuclease/exonuclease/phosphatase 248 573 IPR036691 -
Tsu04g02265 584 SUPERFAMILY DNase I-like 70 567 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02265 Tsu-Chr4 25246662 25249748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02265 321 560 Acyl Lipid Metabolism Gene Families AT2G43900 31.560 8.55e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02265 K24221 - mtr:MTR_4g098850 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00466 05 3619891 3623702 Tsu04g02265 04 25246662 25249748 PCT