Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00370 ATGAGCACCCTCCCTACAACACAAGGGAAAACTGTCCCGGATGCATCCGATTATAAGGGCCGTCCGGCAGACAGGTCCAAAACCGGGGGTTGGACTGCATCCGCCATGATATTAGGCGGTGAAGTAATGGAGAGGTTGACAACACTCGGTATCGCCTTTAATTTGGTAACATATTTGACTGGTACTATGCATTTGGGCAATGCTGCCTCTGCCAATGTTGTTACTAATTTCTTGGGAACTTCCTTTATGTTGTGTTTGTTGGGCGGATTTCTTGCCGATACTTTTTTGGGAAGATACCTCACCATCGCCATCTTTGCAGCTGTTCAAGCAATAGGTGTAACAATATTGACTGTATCAACTATAATTCCAAGCCTACATCCACCAAAATGCACAAAAGATTCTGGATCACCATGCATACAAGCAGACAGCAAACAACTATTAGTGTTGTATTTAGCACTTTATGTCACGGCTCTCGGCACAGGCGGTCTAAAATCTAGCGTCTCCGGATTTGGTTCCGATCAATTTGATGAGTCAgacgaagaagaaaaaaagggtaTGATTAAATTTTTCAGCTGGTTCTATTTTTTCGTAAGTTTAGGGTCTTTGGCAGCGGTGACGGTTCTAGTATACATACAAGATAACCAAGGAAGAAGTTGGGGTTATGGTATTTGTGCGGTTGCAATTGTGATTGGGCTTCTTGTTTACTTGTCCGGTACTCGCAAGTACCGAATCAAACAACTTGTGGGGAGTCCCTTGACTCAAATTGCGGTTGTGGTTGTGGCTGCTTGGAGGAAGAGACACATGCAATTGCCCTCCGATTCCTCATTGCTCTATGAAGAGGATGATATCTTATGTGAACCATCTAAGGCCAAGAAGCAGAGGATGCCCCATAGCAAACAGTTCACGTAA 909 0.4334 MSTLPTTQGKTVPDASDYKGRPADRSKTGGWTASAMILGGEVMERLTTLGIAFNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYLTIAIFAAVQAIGVTILTVSTIIPSLHPPKCTKDSGSPCIQADSKQLLVLYLALYVTALGTGGLKSSVSGFGSDQFDESDEEEKKGMIKFFSWFYFFVSLGSLAAVTVLVYIQDNQGRSWGYGICAVAIVIGLLVYLSGTRKYRIKQLVGSPLTQIAVVVVAAWRKRHMQLPSDSSLLYEEDDILCEPSKAKKQRMPHSKQFT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00370 302 SUPERFAMILY MFS general substrate transporter 19 260 IPR036259 -
Tsu05g00370 302 Gene3D MFS general substrate transporter like domains 4 301 IPR036259 -
Tsu05g00370 302 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 295 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu05g00370 302 MobiDBLite consensus disorder prediction 1 28 - -
Tsu05g00370 302 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Tsu05g00370 302 Pfam POT family 99 271 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu05g00370 302 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00370 Tsu-Chr5 2764072 2765321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00370 3 301 Organic Solute Cotransporters AT1G12110 66.113 1.60e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00370 - - lja:Lj2g3v2002190.1 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00370 05 2764072 2765321 Tsu05g00370 05 2764072 2765321 ECH
Tsu05g00370 05 2764072 2765321 Tsu04g02406 04 27027319 27034721 PCT