Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02406 ATGAGTACTCTCCCTCAAACTCATGATCAAACCATTCAAGATGCATGGGACTATAAGGGTAATCCTGCTGAAAGATCCAAAACTGGTGGTTGGACTTCATCTGCAATGATCTTAGGAGTAGAAGCATGTGAGAGGTTAACAACAATGGGCATAGCTGTAAATTTGGTGACATATTTGACTGGTACTATGCATTTAGGAAATGCTTCCTCTGCTAACATAGTAACCAATTTCATGGGAACCTGTTTTATGCTCTGTTTACTTGGAGGTTTTGTAGCCGACACTTTTATTGGAAGATACCTCACCATAGCCATCTTTGCAACTGTTGAAGCAATTGGTGTGACAATCTTAACAATATCAACAATAATTCCAAGCCTTCATCCACCAAAATGCACACATAACAATCTCAAATCATGTGAACCAGCAAACAACACTCAACTAACAGTTCTATACCTAGCACTATACGTAACAGCACTTGGAATTGGAGGTTTAAAATCAAGTGTTTCGGGTTTTGGTTCCGACCAATTCGACGATTCAAATGAAGTCGAAAAAAATCATATGGTGAAATTCTTCAACTGGTTCTTCTTTTTCATAAGCATTGGTTCATTAACAGCAGTGACAATTCTTGTTTACATACAAGATCATGTTGGAAGAGATTGGGGTTATGGAATTTGTGTTTGTGCTATTGTTGTTGCACTTTGTGTGTTCTTGTGGGGAACAAAAAGGTATAGGTTTAAGAAACTTGTTGGGAGTCCTTTGACTCAGATTGCGGTGGTTTATGTCGCGGCGTGGAGGAAGAGGAAGCTGAAATTGCCGTGTGATTTGTCGTCGTTGTATAATTTGgatgatgttgaagatgaaatggtgaggaagaagaaacaaatgTTGCCACATAGCAAACAATTTCGATTCTTGGACAAGGCAGCAATCAAGGAACCAAAAACAGATGGTAATGAAACCAATGTAGCAAAAAAATGGTCTCTATCAACCTTAACAGATGTTGAAGAAGTAAAATTAGTCCTAAGAATGTTACCAATATGGGCAACAACCATAATGTTTTGGACAGTATATGCACAAATGACAACATTTTCAGTATCACAAGCAACAACATTAAACCGTCACATAggaaaatcatttcaaatccCACCAGCATCACTCACTGCTTTCTTCATTGGTAGTATCCTCTTAACAATCCCAATTTATGATCGTCTCATTGTTCCTATAACAagaaaaatcttcaaaaatCCACAAGGATTAACCCCTTTACAAAGAATTGGTGTTGgtttagttttttcaattttagcaATGGTTGCAGCTGCACTCACTGAATTAAAACGTATGAGAATGGTACATTTACATAATTTGACACATGAACCTCATTCGGAGATTCCTATGAGTGTGTTTTGGTTGGTCCCACAATTCTTTTTTGTAGGGTCAGGAGAAGCATTTACTTATATAGGACAATTGGATTTTTTCTTAAGGGAATGTCCTAAAGGGATGAAAACTATGAGTACAGGATTGTTTTTGAGTACATTGTCTTTGGGATTTTTCTTTAGCTCTTTATTGGTTACTTTGGTGCATAAAGTGACAGGTCAGCATAAGCCATGGCTTGCAGATAATCTTAATCAAGGGAAACTCTATGACTTCTATTGGCTTTTGGCTTTGTTGAGTTGTTTGAATTTGGTTATATACTTGATTTGTGCTAATTGGTACGTTTATAAGGATAAAAGACTTGCAGAAGAAGGTATTGAGTTAGAGGAAGCAGATACAGTTTGTCATGCATAG 1782 0.3547 MSTLPQTHDQTIQDAWDYKGNPAERSKTGGWTSSAMILGVEACERLTTMGIAVNLVTYLTGTMHLGNASSANIVTNFMGTCFMLCLLGGFVADTFIGRYLTIAIFATVEAIGVTILTISTIIPSLHPPKCTHNNLKSCEPANNTQLTVLYLALYVTALGIGGLKSSVSGFGSDQFDDSNEVEKNHMVKFFNWFFFFISIGSLTAVTILVYIQDHVGRDWGYGICVCAIVVALCVFLWGTKRYRFKKLVGSPLTQIAVVYVAAWRKRKLKLPCDLSSLYNLDDVEDEMVRKKKQMLPHSKQFRFLDKAAIKEPKTDGNETNVAKKWSLSTLTDVEEVKLVLRMLPIWATTIMFWTVYAQMTTFSVSQATTLNRHIGKSFQIPPASLTAFFIGSILLTIPIYDRLIVPITRKIFKNPQGLTPLQRIGVGLVFSILAMVAAALTELKRMRMVHLHNLTHEPHSEIPMSVFWLVPQFFFVGSGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFFSSLLVTLVHKVTGQHKPWLADNLNQGKLYDFYWLLALLSCLNLVIYLICANWYVYKDKRLAEEGIELEEADTVCHA 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02406 593 Pfam POT family 99 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g02406 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 585 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu04g02406 593 PANTHER PROTEIN NRT1/ PTR FAMILY 6.3-LIKE 10 585 - -
Tsu04g02406 593 Gene3D MFS general substrate transporter like domains 4 580 IPR036259 -
Tsu04g02406 593 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 88 112 IPR018456 GO:0006857|GO:0016020|GO:0022857
Tsu04g02406 593 SUPERFAMILY MFS general substrate transporter 19 574 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02406 Tsu-Chr4 27027319 27034721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g02406 3 590 Organic Solute Cotransporters AT1G12110 63.390 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02406 - - pmum:103337195 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02406 04 27027319 27034721 Tsu04g02406 04 27027319 27034721 ECH
Tsu05g00370 05 2764072 2765321 Tsu04g02406 04 27027319 27034721 PCT