Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00362 ATGGAGAGAACAAATGACTCTAATCATGATGCCCGTTTTTCTTATGTTTCGCTACCCGATGGACTCCACAAGGATGAAACTCTGGTGGAGAGTCGCGGAAAATGGAAGGCGGGGCTTGTGATCTTTTGTGGATTGTTAGTGCTAGTTTCCTTGGTGACATTCAATGGCTACAAGGGATCAAATGGAAATGTAACAACATTGAATGCAAATGAAGatttgaaacaacaaaaaatacctTCGTATAACTGGAAGCCGGTTTCACGTGGTGTATCTGCAGGGGTGTCGGAGAAATCAAATAGGTTGTTCACCAAAACAAACAGCAATGCGGGGTTGCGGTTTCCTTGGCGGTTTCCTTGGAACAATACTATGTTATCATGGCAGAGAACAGCTTTTCATTTCCAACCCGAGGAGAATTGGATGAATGGTCCATTGTACTACAAGGGTTGGTATCACTTCTTCTACCAATACAATCCAAATGCTGCATATTGGGGAGACATAGTATGGGCACATGCTGCCTCAAGGGACTTAATTCATTGGATTCATCTTCCACTGGCAATGGTAGCAGATGAATGGTATGATCAAAATGGTGTGTGGACAGGTTCGGCCACAATATTACCCAATGGTGATATCGTCATGCTATACACCGGTGCCACTGACGCATTGGTACAAGTACAAAATCTTGCCTACCCGGCTGACCCTTCTGATCCACTCCTAATCGATTGGATCAAATACCCGAAAAACCCTGTTCTAGTCCCACCCCCCGAAATTGAGGTTTATGATTTTCGTGATCCTACCACAGCCTGGCTTACCTCTCAAGGTAAATGGCGTATCTCAATTGGTTCTAAGATTAACAAAACCGGCATTGCTTTCGTCTATGATACCGTAGATTTCAAGACTTTTGAGCGTATTGATGGTATACTTCGTGCTGTGCCAAAAACTGGTATGTGGGAGTGTGTTGATTTTTTCCCTGTGTCCACTAATTTGGATATTGGGTTGGATACTTCTGCTAGAGGTGAAGATGTGAAATATGTGATGAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCTCTTGGAACTTATGATGAAAATGGTGCTGATTTCATACCTGATGATACCAAAAATGATGTTGGTACTGGATTGAGGTATGATTATGGTGTATTTTATGCTTCCAAGACATTTTATGATCAAAGTAAAGAGAGAAGAGTGTTGTGGAGCTGGATTGGAGAGTCTGATAGTGAGGACGCCGATGTCGCCAAAGGTTGGGCATCACTCATGGGTATTCCAAGGACAGTGATGCTTGATAAAAAAACTGGTAGCAACTTACTTCAATGGCCTATTGAGGAGGTGGAGAGATTGAGAATGAAAAGTTATAAGTTCCATAATGAGAAGGTCATGCCAGGGTCAGTAGTGTCACTAGATATTGGAACAGAAGCATCACAGTTAGACATTGAAGCTGAGTTTGACATTGATAAAAATGCTATAGAGAAGATAAACCAAACCAATGTGGAGTACAATTGTGAAACCAGTGGTGGAGCAGCTAATCGTGGTGCCTTAGGACCTTTTGGTCTATTGGTTCTTGCAGATGATGGTCTTTCTGAATATACTCCTGTTTACTTTTATGTTGTTAAAGGAAGCAATGGAAATCTCAAGACTTCATTTTGCTCTGATCAAACAAGATCTTCTTTGGCAACTGATGTTGATAAGAGCATCTTTGGAAGCTCTGTTCCAGTACTTGAAGGAGAGAAGCTATCTCTAAGAATATTGGTGGACCATTCTATAGTTGAAAGTTTTGCTCAAGGTGGAAGGACATGTGTGACTTCTAGGGTTTATCCAACAAAAGCCATATATGAAAATGCTCGATTGTTCGTGTTTAATAATGCTACTGAGGCCACTGTTACTACTTCACTCAAAGTTTGGCATATGAATTCTGCATTCATAAAcaataagaaaaaagaagagttAAGATACCCATAA 1980 0.4045 MERTNDSNHDARFSYVSLPDGLHKDETLVESRGKWKAGLVIFCGLLVLVSLVTFNGYKGSNGNVTTLNANEDLKQQKIPSYNWKPVSRGVSAGVSEKSNRLFTKTNSNAGLRFPWRFPWNNTMLSWQRTAFHFQPEENWMNGPLYYKGWYHFFYQYNPNAAYWGDIVWAHAASRDLIHWIHLPLAMVADEWYDQNGVWTGSATILPNGDIVMLYTGATDALVQVQNLAYPADPSDPLLIDWIKYPKNPVLVPPPEIEVYDFRDPTTAWLTSQGKWRISIGSKINKTGIAFVYDTVDFKTFERIDGILRAVPKTGMWECVDFFPVSTNLDIGLDTSARGEDVKYVMKVSLDDDRHDYYALGTYDENGADFIPDDTKNDVGTGLRYDYGVFYASKTFYDQSKERRVLWSWIGESDSEDADVAKGWASLMGIPRTVMLDKKTGSNLLQWPIEEVERLRMKSYKFHNEKVMPGSVVSLDIGTEASQLDIEAEFDIDKNAIEKINQTNVEYNCETSGGAANRGALGPFGLLVLADDGLSEYTPVYFYVVKGSNGNLKTSFCSDQTRSSLATDVDKSIFGSSVPVLEGEKLSLRILVDHSIVESFAQGGRTCVTSRVYPTKAIYENARLFVFNNATEATVTTSLKVWHMNSAFINNKKKEELRYP 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00362 659 CDD GH32_Fruct1-like 138 435 - -
Tsu05g00362 659 Pfam Glycosyl hydrolases family 32 N-terminal domain 132 447 IPR013148 -
Tsu05g00362 659 Gene3D - 460 643 - -
Tsu05g00362 659 SUPERFAMILY Concanavalin A-like lectins/glucanases 447 647 IPR013320 -
Tsu05g00362 659 Gene3D Glycosyl hydrolase domain; family 43 137 459 IPR023296 -
Tsu05g00362 659 SMART glyco_32 132 603 IPR001362 GO:0004553|GO:0005975
Tsu05g00362 659 Pfam Beta-fructofuranosidase, N-terminal domain 14 124 IPR021792 GO:0004564
Tsu05g00362 659 Pfam Glycosyl hydrolases family 32 C terminal 450 642 IPR013189 -
Tsu05g00362 659 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 33 650 - -
Tsu05g00362 659 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 33 650 - -
Tsu05g00362 659 SUPERFAMILY Arabinanase/levansucrase/invertase 125 448 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00362 Tsu-Chr5 2697132 2701496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00362 15 657 Glycoside Hydrolase AT1G12240 61.738 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00362 K01193 - gmx:100798772 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00362 05 2697132 2701496 Tsu04g02425 04 27264929 27268768 PCT