Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00342 ATGGCCGATCTATTTGGATGGATCATCTCCTTCTTCCTCCTCATCGCCTTACTCGTTCTTGTTACTTACCAGGTACTCGTTCTTactattatttcaatttcaatcaatcATTTTTACTTACTTTATCATCATTTCTTGCTGCAGTTAATGTGCCTCGCAGACCTTGAATTTGATTATATTAATCCTTATGATTTCTCATCACGAATAAATGCCGTCGTCTTCCCTGAATTTGTTATTCAAGCTGTCCTTACTTTCTTCTACCTTGTTACTGGCCATTGGATTATGTCATTGTTCTGTCTCCCTTATCTATACTTCAATGTCGGAATGTATAGACAAAAAAAGCATTTAGTTGATGTTACTGAGATATTCAACATGCTTTCATGGGAAAAGAAGCAACGACTCATCAAACTCTTTTATCTTGTTTTAACCCTTTTCCTCTCCGTGTTTTGGATGATCTATACAACATTGGATGACCACTGA 480 0.3521 MADLFGWIISFFLLIALLVLVTYQVLVLTIISISINHFYLLYHHFLLQLMCLADLEFDYINPYDFSSRINAVVFPEFVIQAVLTFFYLVTGHWIMSLFCLPYLYFNVGMYRQKKHLVDVTEIFNMLSWEKKQRLIKLFYLVLTLFLSVFWMIYTTLDDH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00342 159 PANTHER CORNICHON-RELATED 1 32 - -
Tsu05g00342 159 PANTHER CORNICHON FAMILY PROTEIN 1 32 - -
Tsu05g00342 159 PANTHER CORNICHON FAMILY PROTEIN 43 158 - -
Tsu05g00342 159 PANTHER CORNICHON-RELATED 43 158 - -
Tsu05g00342 159 SMART Cornichon_2 4 149 IPR003377 GO:0016192
Tsu05g00342 159 Pfam Cornichon protein 45 149 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00342 Tsu-Chr5 2525752 2528860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00342 K20368 - gmx:100780362 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00342 05 2525752 2528860 Tsu05g00342 05 2525752 2528860 ECH
Tsu04g02449 04 27653833 27657369 Tsu05g00342 05 2525752 2528860 PCT