Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02449 ATGTCTGATCTATTTGCGTGGCTCTTCTCCTTCTTCACCCTTATTGCCTTAATTGTAATCGTCATTTACCAGTTAATGTCCCTGGCAGACCTTGAATTCGATTATATAAATCCTTATGATTCCACATCTCGAATAAACAAAGTGGTTTTGCCTGAGTATTTTACATTAGGTGGCCTCTGTTGCTTCTACCTTTTAACAGGACACTGGATAATGTCACTGTTCTGCGCTCCTTACGTCTACTATAATGTGAGATTGTACAGGCAAGGAAAGCATTTGGTTGATGTTACAGAGATATTCAACATGCTAGCTTCGGAAAAGAAGCAGCGGCTTTTCAAACTCTTCTATCTAATTTTTATCCTATTCCTCTCCTTGTTTTGGTTGATCTACACATCATTGGACGATGATTATGATTAG 414 0.3841 MSDLFAWLFSFFTLIALIVIVIYQLMSLADLEFDYINPYDSTSRINKVVLPEYFTLGGLCCFYLLTGHWIMSLFCAPYVYYNVRLYRQGKHLVDVTEIFNMLASEKKQRLFKLFYLIFILFLSLFWLIYTSLDDDYD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02449 137 PANTHER CORNICHON FAMILY PROTEIN 1 135 - -
Tsu04g02449 137 SMART Cornichon_2 4 125 IPR003377 GO:0016192
Tsu04g02449 137 Pfam Cornichon protein 5 125 IPR003377 GO:0016192
Tsu04g02449 137 PANTHER CORNICHON-RELATED 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02449 Tsu-Chr4 27653833 27657369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02449 K20368 - gmx:100799061 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02449 04 27653833 27657369 Tsu05g00342 05 2525752 2528860 PCT