Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00320 ATGGCTAGCAAATTATTAGCATTCACATTAACATGCCCACGTCCATTTACAGCCTCTACAACACCATCTCCAACTTCAACTACTTTGCTTCCAACATTCTCCACTTTTGCTTCTAGAGTCCAACCTATTCAACTCAATGCTGACCGTCACTCATGCCTTCGTCGCGGCCTATTTGTGTTTCCCCCCAAAGCCACATCGAATCAACAAGATGGCAAGGTTGAGGAAGATGGTGTTGTTGATAGTAAAATCTTACAATATTGTAGCATAGACCAAAAAGAGAAGAAATCACTTGGTGAACTTGAGCAAGATTTTCTTCAAGCACTTCAAGCATTCTACTATGAGGGAAAAGCAACTATGTCAAATGAAGAATTTGATAATCTCAAAGAAGAACTTATGTGGGAAGGAAGCACCGTTGTAATGCTAAGTTCTTCTGAGCAAAAATTTCTGGAAGCATCTATTGCTTATGTGTCTGGAAAACCAATTATGAGTGATAAAGAGTTTGATGAATTAAAAATGAAGCTAAAGATTGAAGGGAGTGAGATTGTTGCCGAGGGTCCCCGGTGCAGTCTTCGAAGTAGAAAGGTTTACAGTGACCTTTCTGTTGATTATTTAAAGGCCTTCCTACTGAAACTCCCAGCAACTGTGGTTGCATTAGGATTATTCTTCTTCCTTGATGATGTGACTGGATTCGAGATCAATTATCTCATAGCGATTCCAGAACCTTTCAGTTTCATTTTGACTTGGTTTGCTGCTGTTCCCTTCATTCTGTGGTTTGCTCAGTCAATTACAAATGcaattataaaagatttcttgaTTCTTAAGggTCCTTGTCCTAATTGTGCTACTGAAAACACATCCTTCTTTGGGACTATATTGTCAATTTCAAGTGGCAATTCAACCAACAAAGTCAAATGTGAGAACTGTGGAACTGTGATGGTATATGATTCAACAACAAGATTGATTACATTGCCAGAAGGAAGTAATGCATAA 990 0.3808 MASKLLAFTLTCPRPFTASTTPSPTSTTLLPTFSTFASRVQPIQLNADRHSCLRRGLFVFPPKATSNQQDGKVEEDGVVDSKILQYCSIDQKEKKSLGELEQDFLQALQAFYYEGKATMSNEEFDNLKEELMWEGSTVVMLSSSEQKFLEASIAYVSGKPIMSDKEFDELKMKLKIEGSEIVAEGPRCSLRSRKVYSDLSVDYLKAFLLKLPATVVALGLFFFLDDVTGFEINYLIAIPEPFSFILTWFAAVPFILWFAQSITNAIIKDFLILKGPCPNCATENTSFFGTILSISSGNSTNKVKCENCGTVMVYDSTTRLITLPEGSNA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00320 329 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 1 329 IPR039987 GO:0009535|GO:0009773|GO:0016730
Tsu05g00320 329 PANTHER PGR5-LIKE PROTEIN 1A 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00320 Tsu-Chr5 2398792 2401553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00320 - - gmx:100785186 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00320 05 2398792 2401553 Tsu05g00320 05 2398792 2401553 ECH
Tsu04g02469 04 27894337 27898956 Tsu05g00320 05 2398792 2401553 PCT