Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g02469 ATGTTCACAGCAACAACCAAAGTAGTTTTCACATTAACACCCCCTCGTTTATGTTCTGCACCCCCAACACCATTCGTTccaatttcttcttcattttctcgTCCTCAATTCAGTTCCCGCCAATTATGTCTTCGCCGGAGAGTATTCCTACTTTCCCCTAAAGCCACCGCAGATCAAGggaaggttgaagaatttgaaggagATGCTGTTATTGATAGTAATGTCTTACCATATTGTAGTTTAGatcaaaaaaaagagaagaaatctGTTGGTGAACTTGAGCAAGAATTTCTTCAAGCACTCCAATCATTCTATTATGAGGGAAAGGCTATTATGTCGAATGAAGAATTTGATAATCTCAAGGAAGAACTCATGTGGGAAGGAAGCAGTGTTGTTATGCTAAGTTCAGATGAGCAAAAATTTCTTGAAGCTTCTATGGCTTATGTATCTGGAAATCCAATTTTGAATGACAGAGAGTATGATGCATTGAAATTGAGGCTAAAGAGGGAAGGGAGTGAAATTGTGGTCGAGGGTCCAAGGTGCAGTCTTCGAAGTAAAAAGGTTTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTCTTGCTGAATGTCCCAGCCACGGTGGTTGCATTAGGATTGTTCTTCTTCCTTGATGATATAACTGGATTTGAGATCACTTACTTGCTAGAGCTGCCGGAGCCTTTTAGTTTCATTTTCACTTGGTTTGCTGCCGTTCCCCTCATCGTATATCTAGCTCTATCACTAACAAGAGCCATTATCAAAGATTTCGTGATTTTAAAGGTATGA 807 0.368 MFTATTKVVFTLTPPRLCSAPPTPFVPISSSFSRPQFSSRQLCLRRRVFLLSPKATADQGKVEEFEGDAVIDSNVLPYCSLDQKKEKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILNDREYDALKLRLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKV 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g02469 268 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 5 267 IPR039987 GO:0009535|GO:0009773|GO:0016730
Tsu04g02469 268 PANTHER PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC 5 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g02469 Tsu-Chr4 27894337 27898956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g02469 - - gmx:100784314 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02469 04 27894337 27898956 Tsu04g02469 04 27894337 27898956 ECH
Tsu04g02469 04 27894337 27898956 Tsu05g00320 05 2398792 2401553 PCT