Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00294 ATGGCTATTATCATAAAAAGAAATCTCTCCATCTTCCTCTTAATCGCCATAACCTCCATCGCCGCAGCACAAGCCGGAAGATTCAACATCACAAACAAATGCAACTACACCGTATGGGCTGCAGCCTTTCCAGGCGGTGGCGTAAAACTTAACACCAACGAATCATGGAACATGAACATAACCAACGGCACAAGTAACGCAAGAATCTGGGGTCGAACCAATTGCACGTTCGACAACTTAGGTTTAGGAAAGTGTCAAACCGGTGATTGTAACGGAACACTCGAGTGTCAAACAGTTGGTACACCACCAAACACAATCCTAGAATTTTCTTTGAACACATACAATGACCTCGATTTCTACGATGTTTCTCTTGTACAAGGTTTCAACATCCCAATTAAGTTGTCACCATCATATAATTCTTGTGGTACCGTTAATTGTACCGCGGACATCACCGGAGAGTGTCCTACTCAACTTCAGGTACCAGGTGGTTGTAACAATCCTTGTACAACGTTTAATACACCTGAATATTGTTGCAACTCTGTTGCTCGCTCTGCCGTTGTTGCTACCAATGCCTCTGCTACTTGTGCACCAACAAATTACTCTAAATTCTTTAAGGAAAGGTGCCCTTATGCTTATAGTTACCCTAAAGATGATGCAACAAGCACATTCAGTTGTATGGGAGGAACAACTTATGATGTTGTATTTTGTCCTTAA 714 0.4216 MAIIIKRNLSIFLLIAITSIAAAQAGRFNITNKCNYTVWAAAFPGGGVKLNTNESWNMNITNGTSNARIWGRTNCTFDNLGLGKCQTGDCNGTLECQTVGTPPNTILEFSLNTYNDLDFYDVSLVQGFNIPIKLSPSYNSCGTVNCTADITGECPTQLQVPGGCNNPCTTFNTPEYCCNSVARSAVVATNASATCAPTNYSKFFKERCPYAYSYPKDDATSTFSCMGGTTYDVVFCP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00294 237 Gene3D Thaumatin 26 237 IPR037176 -
Tsu05g00294 237 PIRSF PR5 2 237 IPR001938 -
Tsu05g00294 237 PRINTS Pathogenesis-related protein signature 68 79 IPR001938 -
Tsu05g00294 237 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Tsu05g00294 237 PRINTS Pathogenesis-related protein signature 46 55 IPR001938 -
Tsu05g00294 237 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Tsu05g00294 237 PRINTS Pathogenesis-related protein signature 227 236 IPR001938 -
Tsu05g00294 237 PRINTS Pathogenesis-related protein signature 81 110 IPR001938 -
Tsu05g00294 237 PANTHER OS03G0233200 PROTEIN 4 237 IPR001938 -
Tsu05g00294 237 ProSitePatterns Thaumatin family signature. 81 96 IPR017949 -
Tsu05g00294 237 SMART tha2 28 237 IPR001938 -
Tsu05g00294 237 ProSiteProfiles Thaumatin family profile. 25 237 IPR001938 -
Tsu05g00294 237 Pfam Thaumatin family 32 237 IPR001938 -
Tsu05g00294 237 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 4 237 - -
Tsu05g00294 237 SUPERFAMILY Osmotin, thaumatin-like protein 27 237 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00294 Tsu-Chr5 2168976 2170122 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00294 11 237 Receptor kinase-like Gene Family AT5G38280 36.145 8.60e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00294 - - gmx:100037479 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00294 05 2168976 2170122 Tsu05g00294 05 2168976 2170122 ECH
Tsu05g00294 05 2168976 2170122 Tsu02g00500 02 4185514 4186445 PCT